RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CDKN3Q16667 212 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 ALS2CLQ60I27 953 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 PDPK2PQ6A1A2 396 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 ENPP7Q6UWV6 458 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 MACC1Q6ZN28 852 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 NLRP9Q7RTR0 991 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 PARGQ86W56 976 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 TMPRSS12Q86WS5 348 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 HEATR4Q86WZ0 1026 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 IFT20Q8IY31 132 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 TRAM1L1Q8N609 369 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 GLIS1Q8NBF1 620 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 OR52K1Q8NGK4 314 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.89□□□□□ -1.154e-6■■■■□ 24.2
TRAPPC12-221ENST00000489032 SLCO2A1Q92959 643 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 HIC2Q96JB3 615 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 PLEKHG4BQ96PX9 1271 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 SMIM14Q96QK8 99 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 KRT12Q99456 494 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 RIOK2Q9BVS4 552 aaKnown RBP7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 SPATA16Q9BXB7 569 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 SEMA4CQ9C0C4 833 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 ZMAT3Q9HA38 289 aaKnown RBP7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 BPIFA1Q9NP55 256 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 BFARQ9NZS9 450 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 OGFRQ9NZT2 677 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 MOSPD1Q9UJG1 213 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 APPL1Q9UKG1 709 aa7.89□□□□□ -1.15
TRAPPC12-221ENST00000489032 GLYATL1P3A0A0U1RQE8 302 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 A0A0U1RQS6 177 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 SPTY2D1-AS1A0A0U1RR47 76 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 A0A1B0GTQ1 180 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 HEATR9A2RTY3 570 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 NEMP2A6NFY4 417 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 ZNF785A8K8V0 405 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TNFSF14O43557 240 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TNFP01375 233 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 KITP10721 976 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 CTSEP14091 401 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 JUPP14923 745 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TPH1P17752 444 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 GM2AP17900 193 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 ADRA1DP25100 572 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 PEX2P28328 305 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 SLC7A1P30825 629 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TRIM23P36406 574 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 RXRGP48443 463 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 NPY2RP49146 381 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.155e-7■■■■□ 26.5
TRAPPC12-221ENST00000489032 PPARDQ03181 441 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 OLIG2Q13516 323 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 PTK6Q13882 451 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 LY6DQ14210 128 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 SPATS1Q496A3 300 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 HENMT1Q5T8I9 393 aaKnown RBP7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 C1QL3Q5VWW1 255 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 DHRS13Q6UX07 377 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TTC30BQ8N4P2 665 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 BBOF1Q8ND07 529 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 PPHLN1Q8NEY8 458 aaKnown RBP7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 OR4K2Q8NGD2 314 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 OR56A4Q8NGH8 313 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 CPT1CQ8TCG5 803 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 STYXQ8WUJ0 223 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 FGF11Q92914 225 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 SCAMP4Q969E2 229 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 FUBP1Q96AE4 644 aaKnown RBP7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 C19orf43Q9BQ61 176 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 IL22Q9GZX6 179 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 XAB2Q9HCS7 855 aaKnown RBP7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 CASS4Q9NQ75 786 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 PARPBPQ9NWS1 579 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 IL17CQ9P0M4 197 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 NFKBIL1Q9UBC1 381 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 KLQ9UEF7 1012 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TESMINQ9Y4I5 508 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 OR1A2Q9Y585 309 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 PCDHGB2Q9Y5G2 931 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 ARL5AQ9Y689 179 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 KNTC1P50748 2209 aa7.88□□□□□ -1.15
TRAPPC12-221ENST00000489032 TEP1Q99973 2627 aaKnown RBP7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 LRRK1Q38SD2 2015 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 ENO4A6NNW6 628 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 DNALI1O14645 258 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 INPP4BO15327 924 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 TTI1O43156 1089 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 BUD23O43709 281 aaKnown RBP7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 SLC25A14O95258 325 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 MATN4O95460 622 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 CSF2P04141 144 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 ALPPL2P10696 532 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 MLNP12872 115 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 GP1BBP13224 206 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 ITGALP20701 1170 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 TNFRSF8P28908 595 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 MAGEA6P43360 314 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 UCNP55089 124 aa7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 SRP54P61011 504 aaKnown RBP7.87□□□□□ -1.15
TRAPPC12-221ENST00000489032 VSNL1P62760 191 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms