RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 PRR27Q6MZM9 219 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 MFSD12Q6NUT3 480 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 LRRC31Q6UY01 552 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 GALNTL5Q7Z4T8 443 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ARHGAP22Q7Z5H3 698 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 DNAJB7Q7Z6W7 309 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 TMPRSS11BQ86T26 416 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 NDUFAF2Q8N183 169 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 IRGQQ8WZA9 623 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM162AQ96A26 154 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 THOC1Q96FV9 657 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 RMDN2Q96LZ7 410 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 FER1L6-AS2Q96M78 137 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ADPGKQ9BRR6 497 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 URM1Q9BTM9 101 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 TUBB2BQ9BVA1 445 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ANKRD2Q9GZV1 360 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 MIS12Q9H081 205 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 MYNNQ9NPC7 610 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 GKN1Q9NS71 199 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 CACNG4Q9UBN1 327 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ZDHHC2Q9UIJ5 367 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 DAPK2Q9UIK4 370 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 ABT1Q9ULW3 272 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 KCNJ14Q9UNX9 436 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 EXOC6BQ9Y2D4 811 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 WDR62O43379 1518 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 EFCAB6Q5THR3 1501 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 FANCD2Q9BXW9 1451 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 WDR7Q9Y4E6 1490 aa3.53□□□□□ -1.84
ECHDC1-217ENST00000488087 C9orf84Q5VXU9 1444 aa3.53□□□□□ -1.85
ECHDC1-217ENST00000488087 ERBINQ96RT1 1412 aa3.53□□□□□ -1.85
ECHDC1-217ENST00000488087 YTHDC2Q9H6S0 1430 aaKnown RBP3.53□□□□□ -1.85
ECHDC1-217ENST00000488087 ADGBQ8N7X0 1667 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CC2D2AQ9P2K1 1620 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 PCDH11YQ9BZA8 1340 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 A0A1W2PPM1 405 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 A0A1W2PPQ1 181 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ANKRD61A6NGH8 418 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 TRIM77I1YAP6 450 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 PSMA7O14818 248 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 POLR3GO15318 223 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 NEBLO76041 1014 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CELF2O95319 508 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 PLA2G4BP0C869 781 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 SMIM18P0DKX4 95 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 HSPA8P11142 646 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 IFNAR1P17181 557 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 JAK1P23458 1154 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CHRNB4P30926 498 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CEACAM8P31997 349 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 FNTAP49354 379 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 RBP5P82980 135 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CCZ1BP86790 482 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CCZ1P86791 482 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 BFSP1Q12934 665 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 TAF7Q15545 349 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 KRTAP24-1Q3LI83 254 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 KIAA1644Q3SXP7 199 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF876PQ49A33 203 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ARHGEF16Q5VV41 709 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 C11orf63Q6NUN7 778 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 TMEM139Q8IV31 216 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CCDC170Q8IYT3 715 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF611Q8N823 705 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CEP112Q8N8E3 955 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 NPEPL1Q8NDH3 523 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 KBTBD8Q8NFY9 601 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 OR11H4Q8NGC9 324 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 GRHL3Q8TE85 626 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 DEPDC1BQ8WUY9 529 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 MOB3AQ96BX8 217 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 DHX58Q96C10 678 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 DTNBP1Q96EV8 351 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 SENP5Q96HI0 755 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ANKRD27Q96NW4 1050 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 TESK2Q96S53 571 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 FERMT1Q9BQL6 677 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CRACR2AQ9BSW2 395 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 Q9N2K0 584 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 SIX2Q9NPC8 291 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 SPHK1Q9NYA1 384 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 SUN2Q9UH99 717 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 RNF150Q9ULK6 438 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 RIPK3Q9Y572 518 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 LIPGQ9Y5X9 500 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CDK13Q14004 1512 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 KIAA0586Q9BVV6 1533 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 CFTRP13569 1480 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 PBRM1Q86U86 1689 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 RGS12O14924 1447 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ABCC5O15440 1437 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 NOS1P29475 1434 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 PPIP5K1Q6PFW1 1433 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 SSH2Q76I76 1423 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 ADGRL3Q9HAR2 1447 aa3.52□□□□□ -1.85
ECHDC1-217ENST00000488087 RNF17Q9BXT8 1623 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms