RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 EMP3P54852 163 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CDKN2DP55273 166 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MRPL49Q13405 166 aaKnown RBP10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TSTA3Q13630 321 aaPredicted RBP10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 DSG2Q14126 1118 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PPP1R7Q15435 360 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MUM1Q2TAK8 710 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 FAM214AQ32MH5 1076 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TUBB8Q3ZCM7 444 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PLEKHN1Q494U1 663 aaPredicted RBP10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CRB2Q5IJ48 1285 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PRAMEF13Q5VWM6 474 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 Q6ZS92 163 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IGDCC3Q8IVU1 814 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 STT3BQ8TCJ2 826 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CALML6Q8TD86 181 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 C19orf60Q96EN9 201 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CRB3Q9BUF7 120 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CCDC68Q9H2F9 335 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZNF304Q9HCX3 659 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SEMA3GQ9NS98 782 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IARS2Q9NSE4 1012 aaKnown RBP10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TRMT1Q9NXH9 659 aaKnown RBP10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ASIC3Q9UHC3 531 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 VPS4AQ9UN37 437 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 NTNG1Q9Y2I2 539 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
RAB11FIP3-210ENST00000487899 POLEQ07864 2286 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZSCAN12O43309 604 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 FOXS1O43638 330 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IPO13O94829 963 aaKnown RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CCNDBP1O95273 360 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SYF2O95926 243 aaKnown RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZGLP1P0C6A0 271 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 COX6A1P12074 109 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ITGA3P26006 1051 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 HSD17B2P37059 387 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PGGT1BP53609 377 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SP140Q13342 867 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 RBBP7Q16576 425 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZXDCQ2QGD7 858 aaPredicted RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 VWA2Q5GFL6 755 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IGFL2Q6UWQ7 119 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 UBE2R2Q712K3 238 aaPredicted RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 VN1R4Q7Z5H5 301 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CUZD1Q86UP6 607 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PLD3Q8IV08 490 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PRSS58Q8IYP2 241 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SHISA5Q8N114 240 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 C8orf44Q96CB5 159 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SNRNP40Q96DI7 357 aaKnown RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MVB12AQ96EY5 273 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CERS2Q96G23 380 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CABS1Q96KC9 395 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PWWP2AQ96N64 755 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 BARD1Q99728 777 aaKnown RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 EBNA1BP2Q99848 306 aaKnown RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ATP13A2Q9NQ11 1180 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SLAMF7Q9NQ25 335 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZNF282Q9UDV7 671 aaPredicted RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MRPS2Q9Y399 296 aaKnown RBP10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 LRBAP50851 2863 aa10.67□□□□□ -0.7
RAB11FIP3-210ENST00000487899 BLACEA4D250 179 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZNF839A8K0R7 811 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MAP2K7O14733 419 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SEMA7AO75326 666 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TTC4O95801 387 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 HPP00738 406 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 STATHP02808 62 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ACPPP15309 386 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TCP1P17987 556 aaKnown RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SLC26A3P40879 764 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ABATP80404 500 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 RELAQ04206 551 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 HIF1AQ16665 826 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PHKG1Q16816 387 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 SPANXN3Q5MJ09 141 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 STEAP4Q687X5 459 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TRMT10BQ6PF06 316 aaKnown RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PRSS41Q7RTY9 318 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 GALNT7Q86SF2 657 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ZC3H7AQ8IWR0 971 aaKnown RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 IQCKQ8N0W5 287 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 PPP4R1Q8TF05 950 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 EEF1AKMT1Q8WVE0 214 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 MIEF2Q96C03 454 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 WDR77Q9BQA1 342 aaPredicted RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TRIM51Q9BSJ1 452 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 DRC3Q9H069 523 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ILKAPQ9H0C8 392 aaPredicted RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ABCF3Q9NUQ8 709 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 ASF1BQ9NVP2 202 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 TRMT6Q9UJA5 497 aaKnown RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 C3orf18Q9UK00 162 aa10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 NOVA2Q9UNW9 492 aaKnown RBP10.66□□□□□ -0.7
RAB11FIP3-210ENST00000487899 CHMP2BQ9UQN3 213 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms