RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MAP2K2P36507 400 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 TNNT3P45378 269 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 NPBWR1P48145 328 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 VEGFCP49767 419 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 DNA2P51530 1060 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 LBX1P52954 281 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 LINC01547P58512 204 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 IL10RBQ08334 325 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 ITGA9Q13797 1035 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 TRIM29Q14134 588 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 HERC3Q15034 1050 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 CTU2Q2VPK5 515 aaKnown RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 LACTB2Q53H82 288 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 SPDYCQ5MJ68 293 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 FFAR4Q5NUL3 377 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 TXNRD3NBQ6F5E7 133 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 C15orf39Q6ZRI6 1047 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 FCRLAQ7L513 359 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 CCDC91Q7Z6B0 441 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 PIGZQ86VD9 579 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 ATAD1Q8NBU5 361 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR7A2PQ8NGA2 310 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR4C15Q8NGM1 316 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 GOT1L1Q8NHS2 421 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 HPSE2Q8WWQ2 592 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 LRR1Q96L50 414 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 C4orf45Q96LM5 186 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 INTS14Q96SY0 518 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 LPAR4Q99677 370 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 MLPHQ9BV36 600 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 COPS7BQ9H9Q2 264 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 RPF1Q9H9Y2 349 aaKnown RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 DNAJC4Q9NNZ3 241 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 SCRT2Q9NQ03 307 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 MRGBPQ9NV56 204 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 INTS9Q9NV88 658 aaKnown RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 EPHA6Q9UF33 1036 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 LEF1Q9UJU2 399 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 CDH7Q9ULB5 785 aa3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 RUVBL2Q9Y230 463 aaKnown RBP3.36□□□□□ -1.87
HMGB1P36-201ENST00000487709 A0A087WW49 117 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 F8VVB4 439 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 F8VWA3 439 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC22A2O15244 555 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 CRCPO75575 148 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 RAD51DO75771 328 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 AP2A2O94973 939 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 MOCS2O96007 188 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 NGFP01138 241 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 FRMD6-AS1P0C7T7 363 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 SLC2A2P11168 524 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 GP1BBP13224 206 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 TUBB2AQ13885 445 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 SQLEQ14534 574 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 P2RY6Q15077 328 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 NHSL2Q5HYW2 709 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 WLSQ5T9L3 541 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 UGT3A1Q6NUS8 523 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 TTC27Q6P3X3 843 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 PSRC1Q6PGN9 363 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 HOOK3Q86VS8 718 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 APLFQ8IW19 511 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM219AQ8IW50 185 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 CCDC60Q8IWA6 550 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 PRSS35Q8N3Z0 413 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM89BQ8N5H3 189 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 DDHD1Q8NEL9 900 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR5AP2Q8NGF4 316 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR10G8Q8NGN5 311 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 NCOA7Q8NI08 942 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 GDAP1Q8TB36 358 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 P2RX5Q93086 422 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 EXOC4Q96A65 974 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 VMP1Q96GC9 406 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 FUCA2Q9BTY2 467 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 TUBB2BQ9BVA1 445 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 RBM4Q9BWF3 364 aaKnown RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 ABCB8Q9NUT2 735 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 TMEM161AQ9NX61 479 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 CHCHD3Q9NX63 227 aaKnown RBP3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 IL36AQ9UHA7 158 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 WDR37Q9Y2I8 494 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 COLEC10Q9Y6Z7 277 aa3.35□□□□□ -1.87
HMGB1P36-201ENST00000487709 A0A1W2PPK0 400 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 KBTBD13C9JR72 458 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM86B1E9PN63 330 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 FCGR3BO75015 233 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 IGLV1-44P01699 117 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 FAM86B2P0C5J1 330 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 SUPT20HL2P0C7V6 817 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 TLX1P31314 330 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 TSFMP43897 325 aaKnown RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 OR3A3P47888 321 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 CDX1P47902 265 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 KRT83P78385 493 aa3.34□□□□□ -1.87
HMGB1P36-201ENST00000487709 RASGEF1BQ0VAM2 473 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms