RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 PIK3R3Q92569 461 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 ZNF622Q969S3 477 aaKnown RBP eCLIP2.73□□□□□ -1.972e-60■■□□□ 12.4
RBM39-234ENST00000487604 RFT1Q96AA3 541 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 SLC22A18Q96BI1 424 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 PSMB7Q99436 277 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 SEPHS2Q99611 448 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 ATF6BQ99941 703 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 PRMT7Q9NVM4 692 aaPredicted RBP2.73□□□□□ -1.97
RBM39-234ENST00000487604 GDE1Q9NZC3 331 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.73□□□□□ -1.97
RBM39-234ENST00000487604 CLIP2Q9UDT6 1046 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 BAIAP2L1Q9UHR4 511 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 PRDM4Q9UKN5 801 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 SELENOKQ9Y6D0 94 aa2.73□□□□□ -1.97
RBM39-234ENST00000487604 GON4LQ3T8J9 2241 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 CASTOR2A6NHX0 329 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 C2CD4DB7Z1M9 353 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 ZBED4O75132 1171 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 GJB3O75712 270 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 SLCO2B1O94956 709 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 AOC1P19801 751 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 LMAN1P49257 510 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 ZNF75DP51815 510 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 TRAP1Q12931 704 aaKnown RBP2.72□□□□□ -1.97
RBM39-234ENST00000487604 ZNF146Q15072 292 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 SNAPC1Q16533 368 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 PRR27Q6MZM9 219 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 IL17RELQ6ZVW7 336 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 CFAP61Q8NHU2 1237 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 CNOT6LQ96LI5 555 aaKnown RBP2.72□□□□□ -1.97
RBM39-234ENST00000487604 CHCHD6Q9BRQ6 235 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 TEX12Q9BXU0 123 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 SLITRK2Q9H156 845 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 GOLPH3LQ9H4A5 285 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 JPT2Q9H910 190 aa2.72□□□□□ -1.97
RBM39-234ENST00000487604 ELF5Q9UKW6 265 aaPredicted RBP2.72□□□□□ -1.97
RBM39-234ENST00000487604 COL16A1Q07092 1604 aaPredicted RBP2.71□□□□□ -1.97
RBM39-234ENST00000487604 IGSF1Q8N6C5 1336 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 ARID2Q68CP9 1835 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 IGHV3-38A0A0C4DH36 116 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 SURF4O15260 269 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 ZNF354AO60765 605 aaPredicted RBP2.71□□□□□ -1.98
RBM39-234ENST00000487604 RAB40ALP0C0E4 278 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 SELEP16581 610 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 FKBP3Q00688 224 aaKnown RBP2.71□□□□□ -1.98
RBM39-234ENST00000487604 POU5F1Q01860 360 aaKnown RBP2.71□□□□□ -1.98
RBM39-234ENST00000487604 SRSF9Q13242 221 aaKnown RBP eCLIP2.71□□□□□ -1.98
RBM39-234ENST00000487604 BAATQ14032 418 aaPredicted RBP2.71□□□□□ -1.98
RBM39-234ENST00000487604 NTRK2Q16620 822 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 REG3GQ6UW15 175 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 RNF130Q86XS8 419 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.71□□□□□ -1.98
RBM39-234ENST00000487604 NSMAFQ92636 917 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 TMCO6Q96DC7 493 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 GHITMQ9H3K2 345 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 EGLN3Q9H6Z9 239 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 GIMAP4Q9NUV9 329 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 RNF150Q9ULK6 438 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 VSIG4Q9Y279 399 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 KIF25-AS1Q9Y6Z4 181 aa2.71□□□□□ -1.98
RBM39-234ENST00000487604 IGHV3-20A0A0C4DH32 117 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 A0A1W2PPK0 400 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 A0A1W2PPM1 405 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 GLTPD2A6NH11 291 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 IPO8O15397 1037 aaKnown RBP2.7□□□□□ -1.98
RBM39-234ENST00000487604 CREB3O43889 395 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 ECE2O60344 883 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 LINGO3P0C6S8 592 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 CSH1P0DML2 217 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 CSH2P0DML3 217 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 PCP11498 1178 aaKnown RBP2.7□□□□□ -1.98
RBM39-234ENST00000487604 KLK2P20151 261 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 CAPN3P20807 821 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 SAT1P21673 171 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 ALDH1B1P30837 517 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 KHKP50053 298 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 ATP4BP51164 291 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 NAP1L1P55209 391 aaKnown RBP2.7□□□□□ -1.98
RBM39-234ENST00000487604 DCDC1P59894 354 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 NDPQ00604 133 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 CUL3Q13618 768 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 PRR30Q53SZ7 412 aaPredicted RBP2.7□□□□□ -1.98
RBM39-234ENST00000487604 FHL5Q5TD97 284 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 BAIAP2L2Q6UXY1 529 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 C1orf122Q6ZSJ8 110 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 ZBED8Q8IZ13 594 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 RTL3Q8N8U3 475 aaKnown RBP2.7□□□□□ -1.98
RBM39-234ENST00000487604 OR52B6Q8NGF0 335 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 OR4D10Q8NGI6 311 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 ATL1Q8WXF7 558 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 DNAI2Q9GZS0 605 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 MYH16Q9H6N6 1097 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 TNFRSF19Q9NS68 423 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 B4GALT7Q9UBV7 327 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 ZNF69Q9UC07 566 aa2.7□□□□□ -1.98
RBM39-234ENST00000487604 RSF1Q96T23 1441 aaPredicted RBP2.69□□□□□ -1.98
RBM39-234ENST00000487604 TRAFD1O14545 582 aaPredicted RBP2.69□□□□□ -1.98
RBM39-234ENST00000487604 PRDM1O75626 825 aa2.69□□□□□ -1.98
RBM39-234ENST00000487604 AADACP22760 399 aa2.69□□□□□ -1.98
RBM39-234ENST00000487604 RNLSQ5VYX0 342 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms