RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ERVK-10P10266 1014 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 HOXB4P17483 251 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-228ENST00000487354 HSF1Q00613 529 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 GBX1Q14549 363 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 ZNF425Q6IV72 752 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 LRRC8BQ6P9F7 803 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 SUN3Q8TAQ9 357 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 PHF10Q8WUB8 498 aaKnown RBP14.52□□□□□ -0.09
MCF2L-228ENST00000487354 LRRC45Q96CN5 670 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 MMABQ96EY8 250 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-228ENST00000487354 ALS2CR12Q96Q35 445 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 ACAT2Q9BWD1 397 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 VN1R1Q9GZP7 353 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 SPATA7Q9P0W8 599 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 MKL2Q9ULH7 1088 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 TTC7AQ9ULT0 858 aaPredicted RBP14.52□□□□□ -0.09
MCF2L-228ENST00000487354 CDC14AQ9UNH5 594 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 ACANP16112 2415 aa14.52□□□□□ -0.09
MCF2L-228ENST00000487354 MAP1AP78559 2803 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-228ENST00000487354 NPIPA5E9PKD4 350 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 FAM227AF5H4B4 570 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 PRMT5O14744 637 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-228ENST00000487354 UQCRHP07919 91 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 C8orf89P0DMQ9 161 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 TBX2Q13207 712 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-228ENST00000487354 KLF1Q13351 362 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-228ENST00000487354 P3H1Q32P28 736 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 RNFT1Q5M7Z0 435 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 ACER2Q5QJU3 275 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 PLAG1Q6DJT9 500 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 DOLPP1Q86YN1 238 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 CRLF3Q8IUI8 442 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 SLC35B2Q8TB61 432 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 AGAP11Q8TF27 550 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 YIPF2Q9BWQ6 316 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 KLHL1Q9NR64 748 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 ANKRD10Q9NXR5 420 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 NPIPA1Q9UND3 350 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 ASB1Q9Y576 335 aa14.51□□□□□ -0.09
MCF2L-228ENST00000487354 PHF3Q92576 2039 aaKnown RBP14.5□□□□□ -0.09
MCF2L-228ENST00000487354 OR2W5A6NFC9 320 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 PRPF4O43172 522 aaKnown RBP eCLIP14.5□□□□□ -0.092e-6■■□□□ 11.6
MCF2L-228ENST00000487354 SUN1O94901 812 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 TJP3O95049 919 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 MATN4O95460 622 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 TPM3P06753 285 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 ICAM2P13598 275 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 CD96P40200 585 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 AP2B1P63010 937 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 CDH17Q12864 832 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 TMED2Q15363 201 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 OR1C1Q15619 314 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 LONRF1Q17RB8 773 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 KRTCAP3Q53RY4 240 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 CTSL3PQ5NE16 218 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 GARNL3Q5VVW2 1013 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 SPINK14Q6IE38 97 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 SUSD1Q6UWL2 747 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 C3P1Q6ZMU1 363 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 MEX3BQ6ZN04 569 aaKnown RBP14.5□□□□□ -0.09
MCF2L-228ENST00000487354 PRSS41Q7RTY9 318 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 MARVELD2Q8N4S9 558 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 CHTF18Q8WVB6 975 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 TSSK1BQ9BXA7 367 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 DRC3Q9H069 523 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 NPDC1Q9NQX5 325 aaPredicted RBP14.5□□□□□ -0.09
MCF2L-228ENST00000487354 TCAF1Q9Y4C2 921 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 PCDHA13Q9Y5I0 950 aa14.5□□□□□ -0.09
MCF2L-228ENST00000487354 TCRBV7S2A1N4TA0A589 114 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 A8MUI8 341 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 ARHGEF33A8MVX0 844 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 F8W8V4 182 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 TTI1O43156 1089 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 PHF2O75151 1096 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 NEURL1O76050 574 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 CMPK1P30085 196 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 RWDD2BP57060 319 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 ALDH6A1Q02252 535 aaKnown RBP14.49□□□□□ -0.09
MCF2L-228ENST00000487354 TFF3Q07654 80 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 BTBD16Q32M84 506 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 FASTKD1Q53R41 847 aaKnown RBP14.49□□□□□ -0.09
MCF2L-228ENST00000487354 CPEB2Q7Z5Q1 589 aaKnown RBP14.49□□□□□ -0.09
MCF2L-228ENST00000487354 LINC00523Q86TU6 105 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 LRRC57Q8N9N7 239 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 OR6P1Q8NGX9 317 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 CYTH2Q99418 400 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 GPAMQ9HCL2 828 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 MRPS30Q9NP92 439 aaKnown RBP14.49□□□□□ -0.09
MCF2L-228ENST00000487354 TNFRSF10DQ9UBN6 386 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 TEKT2Q9UIF3 430 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 DUSP10Q9Y6W6 482 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 VPS13CQ709C8 3753 aa14.49□□□□□ -0.09
MCF2L-228ENST00000487354 HRNRQ86YZ3 2850 aaPredicted RBP14.49□□□□□ -0.09
MCF2L-228ENST00000487354 E9PLN8 166 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 MYO1CO00159 1063 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 PSMD3O43242 534 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ASNA1O43681 348 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 VPS26AO75436 327 aa14.48□□□□□ -0.09
MCF2L-228ENST00000487354 ZNF189O75820 626 aaPredicted RBP14.48□□□□□ -0.09
MCF2L-228ENST00000487354 STATHP02808 62 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms