RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PCYOX1Q9UHG3 505 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 FBXO5Q9UKT4 447 aa23.37■■□□□ 1.33
LIME1-206ENST00000487026 HIVEP3Q5T1R4 2406 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 ZNF839A8K0R7 811 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 GFYI3L273 518 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 HAT1O14929 419 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 ZBTB14O43829 449 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 STATHP02808 62 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 ACPPP15309 386 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 THEMIS2Q5TEJ8 643 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 ATG9BQ674R7 924 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 IGFL2Q6UWQ7 119 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 LINC00696Q6ZRV3 163 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 SLC35F6Q8N357 371 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 FBXO15Q8NCQ5 510 aaPredicted RBP23.36■■□□□ 1.33
LIME1-206ENST00000487026 MMABQ96EY8 250 aaPredicted RBP23.36■■□□□ 1.33
LIME1-206ENST00000487026 VPS50Q96JG6 964 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 CNDP1Q96KN2 507 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 NAP1L3Q99457 506 aaPredicted RBP23.36■■□□□ 1.33
LIME1-206ENST00000487026 CDC14AQ9UNH5 594 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 NOVA2Q9UNW9 492 aaKnown RBP23.36■■□□□ 1.33
LIME1-206ENST00000487026 CNTRLQ7Z7A1 2325 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 HEATR5BQ9P2D3 2071 aa23.36■■□□□ 1.33
LIME1-206ENST00000487026 H7BY64 318 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 P2RX6O15547 441 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 PHF2O75151 1096 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 KLHL18O94889 574 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 CCNDBP1O95273 360 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 EMP3P54852 163 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 FAAH2Q6GMR7 532 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 UBE2R2Q712K3 238 aaPredicted RBP23.35■■□□□ 1.33
LIME1-206ENST00000487026 PPP4R1Q8TF05 950 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 RERGQ96A58 199 aaPredicted RBP23.35■■□□□ 1.33
LIME1-206ENST00000487026 PRAP1Q96NZ9 151 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 OSBPL9Q96SU4 736 aa23.35■■□□□ 1.33
LIME1-206ENST00000487026 IGLV3-12A0A075B6K2 115 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 A0A0A6YYC8 382 aaPredicted RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 A1L4Q6 167 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 ANKUB1A6NFN9 424 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 I3L1I5 382 aaPredicted RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 MAP2K7O14733 419 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 FOXS1O43638 330 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 BANF1O75531 89 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 HPP00738 406 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 ENO3P13929 434 aaPredicted RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 EZRP15311 586 aaKnown RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 IMPA1P29218 277 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 EMP2P54851 167 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 SNRPNP63162 240 aaKnown RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 ABATP80404 500 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 DSG2Q14126 1118 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 SYT16Q17RD7 645 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 KCNMB4Q86W47 210 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 PPIL6Q8IXY8 311 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 AMER2Q8N7J2 671 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 AMER3Q8N944 861 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.34■■□□□ 1.33
LIME1-206ENST00000487026 CALML6Q8TD86 181 aa23.34■■□□□ 1.33
LIME1-206ENST00000487026 AARSD1Q9BTE6 412 aaKnown RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 UTP6Q9NYH9 597 aaKnown RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 ERRFI1Q9UJM3 462 aaPredicted RBP23.34■■□□□ 1.33
LIME1-206ENST00000487026 IDSB3KWA1 339 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 SLC26A3P40879 764 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 SKIV2L2P42285 1042 aaKnown RBP23.33■■□□□ 1.33
LIME1-206ENST00000487026 TIAL1Q01085 375 aaKnown RBP eCLIP23.33■■□□□ 1.33
LIME1-206ENST00000487026 EEF1A2Q05639 463 aaKnown RBP23.33■■□□□ 1.33
LIME1-206ENST00000487026 RNASEH2BQ5TBB1 312 aaKnown RBP23.33■■□□□ 1.33
LIME1-206ENST00000487026 LMNTD2Q8IXW0 634 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 ARHGEF39Q8N4T4 335 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 CATSPER1Q8NEC5 780 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 ACTRT1Q8TDG2 376 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 GRK7Q8WTQ7 553 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 EEF1AKMT1Q8WVE0 214 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 NDNQ99608 321 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 BARD1Q99728 777 aaKnown RBP23.33■■□□□ 1.33
LIME1-206ENST00000487026 ADAMTS6Q9UKP5 1117 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 MRPS2Q9Y399 296 aaKnown RBP23.33■■□□□ 1.33
LIME1-206ENST00000487026 COMMD10Q9Y6G5 202 aa23.33■■□□□ 1.33
LIME1-206ENST00000487026 HEXBP07686 556 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 ANXA5P08758 320 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 COX6A1P12074 109 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 FNTAP49354 379 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 PPP1R7Q15435 360 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 ISLR2Q6UXK2 745 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 NDUFAF7Q7L592 441 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 MVB12AQ96EY5 273 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 MACROD1Q9BQ69 325 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 FAM167BQ9BTA0 163 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 EPS8L2Q9H6S3 715 aa23.32■■□□□ 1.32
LIME1-206ENST00000487026 NSG1A0A0A6YYJ2 146 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 PRPF4O43172 522 aaKnown RBP eCLIP23.31■■□□□ 1.325e-10■□□□□ 10.6
LIME1-206ENST00000487026 MAT1AQ00266 395 aaKnown RBP23.31■■□□□ 1.32
LIME1-206ENST00000487026 CDC16Q13042 620 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 ELOAQ14241 798 aaKnown RBP23.31■■□□□ 1.32
LIME1-206ENST00000487026 CRYMQ14894 314 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 ZNF169Q14929 603 aaPredicted RBP23.31■■□□□ 1.32
LIME1-206ENST00000487026 GARNL3Q5VVW2 1013 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 MBOAT1Q6ZNC8 495 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 KBTBD2Q8IY47 623 aa23.31■■□□□ 1.32
LIME1-206ENST00000487026 SHISA5Q8N114 240 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms