RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ADGRE2Q9UHX3 823 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 PCTPQ9UKL6 214 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 IKZF3Q9UKT9 509 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 ICKQ9UPZ9 632 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.71□□□□□ -1.34
UBR4-214ENST00000486515 FIS1Q9Y3D6 152 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 PCDHGA11Q9Y5H2 935 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 PTPRQQ9UMZ3 2332 aa6.71□□□□□ -1.34
UBR4-214ENST00000486515 PLXND1Q9Y4D7 1925 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 A0A0J9YY10 115 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 URADA6NGE7 173 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TRPC5OSA6NMA1 111 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TCP11X1B4DZS4 312 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TARM1B6A8C7 271 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TRIM38O00635 465 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 E2F3O00716 465 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TXNDC9O14530 226 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 TAPBPO15533 448 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 SH3BP5O60239 455 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ULK1O75385 1050 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 RFPL3O75679 317 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ESRRBO95718 433 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CPNE6O95741 557 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 RPLP0P05388 317 aaKnown RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 DHRS4L1P0CG22 281 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 C1GALT1C1LP0DN25 315 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 KITP10721 976 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 PCNAP12004 261 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 GP1BBP13224 206 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 UGT2B7P16662 529 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 GSTM2P28161 218 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 PRDX3P30048 256 aaKnown RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 SERPINB1P30740 379 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 MLLT3P42568 568 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 SLC6A12P48065 614 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CDH13P55290 713 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 WDR4P57081 412 aaKnown RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 OR1D5P58170 312 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 SKP1P63208 163 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TGM3Q08188 693 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ILKQ13418 452 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 MPP2Q14168 576 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 FASTKQ14296 549 aaKnown RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 TBCCQ15814 346 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 FBXO48Q5FWF7 155 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ARL13AQ5H913 290 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 SH2D4BQ5SQS7 431 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 C10orf62Q5T681 223 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 CACHD1Q5VU97 1274 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ICE2Q659A1 982 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 MED27Q6P2C8 311 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 GUSBP11Q6P575 273 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 WDR74Q6RFH5 385 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 SPESP1Q6UW49 350 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 NXPE4Q6UWF7 544 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 FRMD7Q6ZUT3 714 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CUZD1Q86UP6 607 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CLYBLQ8N0X4 340 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CARFQ8N187 725 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 AGR3Q8TD06 166 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ZNF483Q8TF39 744 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 ZUFSPQ96AP4 578 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 GRAMD1AQ96CP6 724 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CHMP6Q96FZ7 201 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TCTN2Q96GX1 697 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 ZNF382Q96SR6 550 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CCT7Q99832 543 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 PLCD4Q9BRC7 762 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TMEM79Q9BSE2 394 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 SGPP1Q9BX95 441 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TRIM55Q9BYV6 548 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 STRADBQ9C0K7 418 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 SLC7A5P2Q9GIP4 190 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 PITHD1Q9GZP4 211 aaPredicted RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 LRRN3Q9H3W5 708 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 EHD1Q9H4M9 534 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 PELI2Q9HAT8 420 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 PDE7BQ9NP56 450 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 C1GALT1Q9NS00 363 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TMEM184CQ9NVA4 438 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 RIC8BQ9NVN3 520 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 VTI1BQ9UEU0 232 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 KLHL3Q9UH77 587 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 APOBEC2Q9Y235 224 aaKnown RBP6.7□□□□□ -1.34
UBR4-214ENST00000486515 RAP2CQ9Y3L5 183 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 TRPM6Q9BX84 2022 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 CEP192Q8TEP8 1941 aa6.7□□□□□ -1.34
UBR4-214ENST00000486515 IGHV1OR21-1A0A087WYE8 117 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 A0A088AWK7 358 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 PRAMEF33A0A0G2JMD5 474 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 GMNCA6NCL1 334 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 KRT87PA6NCN2 255 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 TLCD2A6NGC4 264 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 E7EQ34 232 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 H7BY64 318 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 BTN3A3O00478 584 aa6.69□□□□□ -1.34
UBR4-214ENST00000486515 CDX4O14627 284 aaPredicted RBP6.69□□□□□ -1.34
UBR4-214ENST00000486515 AZIN1O14977 448 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms