RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CROCCP2Q86T23 111 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 PPM1NQ8N819 430 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 CHDHQ8NE62 594 aaPredicted RBP9.41□□□□□ -0.9
SND1-213ENST00000486037 BRSK1Q8TDC3 778 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 SLC44A1Q8WWI5 657 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 GLYATL1Q969I3 302 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 PTERQ96BW5 349 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 TLCD1Q96CP7 247 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 ARSGQ96EG1 525 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 PGM2Q96G03 612 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 THOC3Q96J01 351 aaKnown RBP9.41□□□□□ -0.9
SND1-213ENST00000486037 ATP6V1G3Q96LB4 118 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 LYSMD1Q96S90 227 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 DPH2Q9BQC3 489 aaPredicted RBP9.41□□□□□ -0.9
SND1-213ENST00000486037 ADGRE3Q9BY15 652 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 SLC7A5P2Q9GIP4 190 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 SPRTNQ9H040 489 aaPredicted RBP9.41□□□□□ -0.9
SND1-213ENST00000486037 CENPHQ9H3R5 247 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
SND1-213ENST00000486037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.41□□□□□ -0.95e-6■□□□□ 8.2
SND1-213ENST00000486037 POMT2Q9UKY4 750 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 RPL26L1Q9UNX3 145 aaKnown RBP9.41□□□□□ -0.9
SND1-213ENST00000486037 ARL5AQ9Y689 179 aa9.41□□□□□ -0.9
SND1-213ENST00000486037 INTS1Q8N201 2190 aaKnown RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 GOLGA6L10A6NI86 522 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 GOLGA8TH3BQL2 631 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 CCL22O00626 93 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 RGS16O15492 202 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 CDH16O75309 829 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ESRRAP11474 423 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 ITGAXP20702 1163 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 PSMA3P25788 255 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 MSH2P43246 934 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 TNFSF10P50591 281 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ZNF140P52738 457 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 TMPRSS15P98073 1019 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ACVR1Q04771 509 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 NFE2L1Q14494 772 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 RASA2Q15283 850 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 TMED2Q15363 201 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 DEFB110Q30KQ9 67 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 HSP90B2PQ58FF3 399 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 HSP90AA5PQ58FG0 334 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 TEDDM1Q5T9Z0 273 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 KIAA0930Q6ICG6 404 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 ZNF449Q6P9G9 518 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 KIRREL2Q6UWL6 708 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ISLR2Q6UXK2 745 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 TMEM200AQ86VY9 491 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 CTAGE3PQ8IX95 158 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 FAM20CQ8IXL6 584 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 RIBC1Q8N443 379 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 GOLGA6L1Q8N7Z2 621 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 OR13C4Q8NGS5 318 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 OR13J1Q8NGT2 312 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 MZB1Q8WU39 189 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 DNAJC1Q96KC8 554 aaKnown RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 LHPPQ9H008 270 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 PPCSQ9HAB8 311 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 FAM60AQ9NP50 221 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 C20orf96Q9NUD7 363 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 PKD2L2Q9NZM6 624 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ABI3Q9P2A4 366 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 IFT80Q9P2H3 777 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 PSMC3IPQ9P2W1 217 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 NDOR1Q9UHB4 597 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 TBK1Q9UHD2 729 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
SND1-213ENST00000486037 RIMKLBQ9ULI2 386 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 MEMO1Q9Y316 297 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ZNF711Q9Y462 761 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 HS3ST3B1Q9Y662 390 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 ANK2Q01484 3957 aa9.4□□□□□ -0.9
SND1-213ENST00000486037 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.91
SND1-213ENST00000486037 ATRQ13535 2644 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 HMGB1P1B2RPK0 211 aaPredicted RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 GPR89AB7ZAQ6 455 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 CDK14O94921 469 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 SLCO2B1O94956 709 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 VAPBO95292 243 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 F7P08709 466 aaPredicted RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 MSL3P1P0C860 447 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 GPR89BP0CG08 455 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 MTHFD1P11586 935 aaKnown RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 FOSL1P15407 271 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 MMP11P24347 488 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 HALP42357 657 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 CTSCP53634 463 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 ADAM8P78325 824 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 ARG2P78540 354 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 NAB1Q13506 487 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 TAF1AQ15573 450 aaPredicted RBP9.39□□□□□ -0.91
SND1-213ENST00000486037 PDPK2PQ6A1A2 396 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 RHBDD2Q6NTF9 364 aa9.39□□□□□ -0.91
SND1-213ENST00000486037 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms