RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SONP18583 2426 aaKnown RBP6.3□□□□□ -1.4
SMC4-217ENST00000485867 MXRA5Q9NR99 2828 aa6.3□□□□□ -1.4
SMC4-217ENST00000485867 MPDZO75970 2070 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 GSAPA4D1B5 854 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 ZNF839A8K0R7 811 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 ACOT7O00154 380 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 MATN2O00339 956 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 HCRTR1O43613 425 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 PRAMEF2O60811 474 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 KCNJ13O60928 360 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 OR2B3O76000 313 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 SLPIP03973 132 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 CHRNB2P17787 502 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 PRDX3P30048 256 aaKnown RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 ADSLP30566 484 aaPredicted RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 CDH6P55285 790 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 CDR2Q01850 454 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 OGDHQ02218 1023 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 DSC2Q02487 901 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 CACNG1Q06432 222 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 TFF3Q07654 80 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 CHD3Q12873 2000 aaKnown RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 PRKAA1Q13131 559 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 XRCC4Q13426 336 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 NFE2L1Q14494 772 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 CAMK4Q16566 473 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 PPP6R3Q5H9R7 873 aaPredicted RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 YOD1Q5VVQ6 348 aaPredicted RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 CES4AQ5XG92 561 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 AMZ2Q86W34 360 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 ZNF677Q86XU0 584 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 REXO1L1PQ8IX06 675 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 ATPAF2Q8N5M1 289 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 TRAM1L1Q8N609 369 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 TEX26Q8N6G2 289 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 DNAAF3Q8N9W5 541 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 WFDC11Q8NEX6 87 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 OR11G2Q8NGC1 345 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 NSMCE1Q8WV22 266 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 PSMF1Q92530 271 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 HAS2Q92819 552 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 FKBP10Q96AY3 582 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 DMRTA2Q96SC8 542 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 NAA15Q9BXJ9 866 aaKnown RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 POLR1EQ9GZS1 481 aaKnown RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 SPRTNQ9H040 489 aaPredicted RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 VPS11Q9H270 941 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 LIME1Q9H400 295 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 MRM3Q9HC36 420 aaKnown RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 PCDH9Q9HC56 1237 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 FAM60AQ9NP50 221 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 TXLNGQ9NUQ3 528 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 ETNK2Q9NVF9 386 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 CWC15Q9P013 229 aaKnown RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 ADAM22Q9P0K1 906 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 PLEKHA6Q9Y2H5 1048 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 TESMINQ9Y4I5 508 aa6.29□□□□□ -1.4
SMC4-217ENST00000485867 HRNRQ86YZ3 2850 aaPredicted RBP6.29□□□□□ -1.4
SMC4-217ENST00000485867 ZNF407Q9C0G0 2248 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ANKRD62A6NC57 917 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 E9PLN8 166 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 F8VZ95 297 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 BTN3A1O00481 513 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ADAM10O14672 748 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ZSCAN9O15535 394 aaPredicted RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 PROM1O43490 865 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 POP7O75817 140 aaKnown RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 USP1O94782 785 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ZWINTO95229 277 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 FGFR1OPO95684 399 aaKnown RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 HPP00738 406 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 F10P00742 488 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 CALB1P05937 261 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ITGAXP20702 1163 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 CA4P22748 312 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 DNASE1P24855 282 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 GABRA4P48169 554 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 HCAR3P49019 387 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 CTSCP53634 463 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ITKQ08881 620 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 TMEM115Q12893 351 aaPredicted RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 GTF2H3Q13889 308 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 RBBP7Q16576 425 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 DEFB110Q30KQ9 67 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 SPDYAQ5MJ70 313 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ERMARDQ5T6L9 678 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 DNAJC24Q6P3W2 148 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 CYP4V2Q6ZWL3 525 aaPredicted RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 MON1BQ7L1V2 547 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 PHF13Q86YI8 300 aaPredicted RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 CREBRFQ8IUR6 639 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 HOMEZQ8IX15 550 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMC4-217ENST00000485867 OR4E2Q8NGC2 313 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 BRIX1Q8TDN6 353 aaKnown RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 AGAP11Q8TF27 550 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 THAP3Q8WTV1 239 aaPredicted RBP6.28□□□□□ -1.4
SMC4-217ENST00000485867 C12orf66Q96MD2 445 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 GPR137Q96N19 417 aa6.28□□□□□ -1.4
SMC4-217ENST00000485867 GNRHR2Q96P88 292 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms