RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ACY1Q03154 408 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 TSNAXIP1Q2TAA8 658 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 C1orf189Q5VU69 101 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 FAM199XQ6PEV8 388 aaPredicted RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 LCTLQ6UWM7 567 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 TIPARPQ7Z3E1 657 aaKnown RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 VASH2Q86V25 355 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 MCATQ8IVS2 390 aaKnown RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 GALNT6Q8NCL4 622 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 SLC5A11Q8WWX8 675 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 ZCCHC14Q8WYQ9 949 aaKnown RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 CABS1Q96KC9 395 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CDK15Q96Q40 435 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CD244Q9BZW8 370 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 SLC17A7Q9P2U7 560 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 LGALS13Q9UHV8 139 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 ACACBO00763 2458 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 SCN3AQ9NY46 2000 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 A0A1B0GTL3 188 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 SYCE1LA8MT33 242 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 H3BMH7 237 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 PPP6CO00743 305 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 COPEO14579 308 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CLGNO14967 610 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 RGS16O15492 202 aaPredicted RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 ZNF749O43361 778 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CAPNS1P04632 268 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 RBP1P09455 135 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 CD22P20273 847 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CDH13P55290 713 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CDC16Q13042 620 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 SETDB1Q15047 1291 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 PDK4Q16654 411 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 LCN10Q6JVE6 187 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CEACAM20Q6UY09 585 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 MYLK4Q86YV6 388 aaPredicted RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 TMEM151BQ8IW70 566 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 TEX9Q8N6V9 391 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 CCDC63Q8NA47 563 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 RUFY1Q96T51 708 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 ZFYVE21Q9BQ24 234 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 MRPL57Q9BQC6 102 aaKnown RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 SELENOSQ9BQE4 189 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 ROPN1BQ9BZX4 212 aaPredicted RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 PPCSQ9HAB8 311 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 ROPN1Q9HAT0 212 aaPredicted RBP11.37□□□□□ -0.59
APTX-227ENST00000485479 PILRAQ9UKJ1 303 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 DYRK1BQ9Y463 629 aa11.37□□□□□ -0.59
APTX-227ENST00000485479 UQCRHLA0A096LP55 91 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 TARM1B6A8C7 271 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 H0YGG7 62 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 NVLO15381 856 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 MAP3K7O43318 606 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 DLX3O60479 287 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 SH3BGRLO75368 114 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 SERPIND1P05546 499 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 UQCRHP07919 91 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 FGF5P12034 268 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 COL6A2P12110 1019 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 CCND1P24385 295 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ARL1P40616 181 aaPredicted RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 CCR10P46092 362 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ALDH18A1P54886 795 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 ITGA1P56199 1179 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 RAB15P59190 212 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ARF3P61204 181 aaPredicted RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 WASHC2DQ5SRD0 308 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 RNF44Q7L0R7 432 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 CCDC91Q7Z6B0 441 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 RNF175Q8N4F7 328 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ACMSDQ8TDX5 336 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ZUFSPQ96AP4 578 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 HAUS8Q9BT25 410 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 DDA1Q9BW61 102 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 DNAJC11Q9NVH1 559 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 OPTCQ9UBM4 332 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 PLCL2Q9UPR0 1127 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 KCNE2Q9Y6J6 123 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 URB1O60287 2271 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 DSPP15924 2871 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 E2F3O00716 465 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 FFAR3O14843 346 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 GPR42O15529 346 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ZSCAN9O15535 394 aaPredicted RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 OR1F1O43749 312 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 GLRA3O75311 464 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 KATNA1O75449 491 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 CCNDBP1O95273 360 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 B3GALT4O96024 378 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ITPKBP27987 946 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 GGT5P36269 586 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 EIF2S3P41091 472 aaKnown RBP11.36□□□□□ -0.59
APTX-227ENST00000485479 HNF4AP41235 474 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 PIK3CGP48736 1102 aa11.36□□□□□ -0.59
APTX-227ENST00000485479 ABATP80404 500 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms