RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SF1Q15637 639 aaKnown RBP13.98□□□□□ -0.17
LRIF1-202ENST00000485275 RNF165Q6ZSG1 346 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 MTDHQ86UE4 582 aaKnown RBP13.98□□□□□ -0.17
LRIF1-202ENST00000485275 LAS2Q8IYD9 372 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 AFAP1L2Q8N4X5 818 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 MINDY1Q8N5J2 469 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 ANKRD53Q8N9V6 530 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 OR4C6Q8NH72 309 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 STON2Q8WXE9 905 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 MTERF1Q99551 399 aaKnown RBP13.98□□□□□ -0.17
LRIF1-202ENST00000485275 MYLK2Q9H1R3 596 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 ZNF385DQ9H6B1 395 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 UCK1Q9HA47 277 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 PELI2Q9HAT8 420 aa13.98□□□□□ -0.17
LRIF1-202ENST00000485275 LSM1O15116 133 aaKnown RBP13.97□□□□□ -0.17
LRIF1-202ENST00000485275 SIGLEC6O43699 453 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 PRAMEF10O60809 474 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 ULK1O75385 1050 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 UBXN7O94888 489 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 CER1O95813 267 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 CAPZBP47756 277 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 UBAP2LQ14157 1087 aaKnown RBP13.97□□□□□ -0.17
LRIF1-202ENST00000485275 KIR2DS3Q14952 304 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 ZNF425Q6IV72 752 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 ZCCHC8Q6NZY4 707 aaKnown RBP13.97□□□□□ -0.17
LRIF1-202ENST00000485275 TRIM46Q7Z4K8 759 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■■■■■ 81.8
LRIF1-202ENST00000485275 HUS1BQ8NHY5 278 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 ACTRT2Q8TDY3 377 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 SELENOMQ8WWX9 145 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 SLC45A3Q96JT2 553 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 APOLD1Q96LR9 279 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 RILPQ96NA2 401 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 DPH7Q9BTV6 452 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 EFCAB11Q9BUY7 163 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 ELOVL6Q9H5J4 265 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 MRPS30Q9NP92 439 aaKnown RBP13.97□□□□□ -0.17
LRIF1-202ENST00000485275 RXFP3Q9NSD7 469 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 HRASLS2Q9NWW9 162 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 ARMCX1Q9P291 453 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 LRIT1Q9P2V4 623 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 BTBD3Q9Y2F9 522 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 MDC1Q14676 2089 aaKnown RBP13.97□□□□□ -0.17
LRIF1-202ENST00000485275 RP1P56715 2156 aa13.97□□□□□ -0.17
LRIF1-202ENST00000485275 FCHO1O14526 889 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 HAT1O14929 419 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 LCMT2O60294 686 aaKnown RBP13.96□□□□□ -0.17
LRIF1-202ENST00000485275 CHEK2O96017 543 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 PVRP15151 417 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 MAGP20916 626 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 GRIA3P42263 894 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 CCR8P51685 355 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 DDX39BQ13838 428 aaKnown RBP13.96□□□□□ -0.17
LRIF1-202ENST00000485275 SPRED3Q2MJR0 410 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 NKAIN2Q5VXU1 208 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 LAIR1Q6GTX8 287 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 MED27Q6P2C8 311 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 SPESP1Q6UW49 350 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 EFL1Q7Z2Z2 1120 aaKnown RBP13.96□□□□□ -0.17
LRIF1-202ENST00000485275 TUBGCP3Q96CW5 907 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 ERP27Q96DN0 273 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 SLC38A3Q99624 504 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 CCDC28BQ9BUN5 200 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 KLHL25Q9H0H3 589 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 ABCG4Q9H172 646 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 SNX6Q9UNH7 406 aa13.96□□□□□ -0.17
LRIF1-202ENST00000485275 MAGEB17A8MXT2 336 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 YKT6O15498 198 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 NUDT21O43809 227 aaKnown RBP13.96□□□□□ -0.18
LRIF1-202ENST00000485275 PEX11AO75192 247 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 KRT6AP02538 564 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 KRT6BP04259 564 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 SYPP08247 313 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 PCNAP12004 261 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 KRT6CP48668 564 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 GFERP55789 205 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 OR1D5P58170 312 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 CFHR1Q03591 330 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 NR1D2Q14995 579 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 SF3A2Q15428 464 aaKnown RBP13.96□□□□□ -0.18
LRIF1-202ENST00000485275 SPDYAQ5MJ70 313 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 NXNQ6DKJ4 435 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 FCRL6Q6DN72 434 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 ACAD11Q709F0 780 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 CHSY3Q70JA7 882 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 CLNKQ7Z7G1 428 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 PAQR7Q86WK9 346 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 OOSP2Q86WS3 158 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 CHCHD4Q8N4Q1 142 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 EID2Q8N6I1 236 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 AVL9Q8NBF6 648 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 CATSPER2Q96P56 530 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 FCRL4Q96PJ5 515 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 SAR1AQ9NR31 198 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 FAM86C1Q9NVL1 165 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 POMT2Q9UKY4 750 aa13.96□□□□□ -0.18
LRIF1-202ENST00000485275 G3BP2Q9UN86 482 aaKnown RBP13.96□□□□□ -0.18
LRIF1-202ENST00000485275 APOBEC2Q9Y235 224 aaKnown RBP13.96□□□□□ -0.18
LRIF1-202ENST00000485275 C2orf74A8MZ97 194 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms