RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 TMPRSS12Q86WS5 348 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 FAM20CQ8IXL6 584 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 LSMEM2Q8N112 164 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 D2HGDHQ8N465 521 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 TEX9Q8N6V9 391 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 BMPERQ8N8U9 685 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 ANKRD42Q8N9B4 389 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 L3MBTL4Q8NA19 623 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 OR52B6Q8NGF0 335 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 MDM1Q8TC05 714 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 AGAP11Q8TF27 550 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 ZUFSPQ96AP4 578 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 TCTN2Q96GX1 697 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 SEC16BQ96JE7 1060 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 MAGEB10Q96LZ2 347 aaPredicted RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 ZNF285Q96NJ3 590 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 DEPDC7Q96QD5 511 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 DPH7Q9BTV6 452 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 EFCAB11Q9BUY7 163 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 ACAT2Q9BWD1 397 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 GATA5Q9BWX5 397 aaPredicted RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 DRC3Q9H069 523 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 SPNS1Q9H2V7 528 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 NT5DC2Q9H857 520 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 IPPKQ9H8X2 491 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 SYNPO2LQ9H987 977 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 FAM60AQ9NP50 221 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 MLXIPLQ9NP71 852 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 MRPS30Q9NP92 439 aaKnown RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 SEMA4BQ9NPR2 832 aaPredicted RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 TMEM184CQ9NVA4 438 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 GEMIN8Q9NWZ8 242 aaKnown RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 TRPS1Q9UHF7 1281 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 HAO1Q9UJM8 370 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 ZNF225Q9UK10 706 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 SNX7Q9UNH6 387 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 CLCA2Q9UQC9 943 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 TSC22D4Q9Y3Q8 395 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 DYRK1BQ9Y463 629 aa6.17□□□□□ -1.42
NCL-209ENST00000484328 MDC1Q14676 2089 aaKnown RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 CNOT1A5YKK6 2376 aaKnown RBP6.17□□□□□ -1.42
NCL-209ENST00000484328 PTPRZ1P23471 2315 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 A0A1W2PNU3 283 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 TRBC2A0A5B9 178 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 B4E171 279 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 H0YIV9 168 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 TMX2-CTNND1H3BSU7 103 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 H7BY64 318 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PPP6CO00743 305 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 HAT1O14929 419 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CLGNO14967 610 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 HCRTR1O43613 425 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SNNO75324 88 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 CSO75390 466 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 RASSF9O75901 435 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SUPT7LO94864 414 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CLDN9O95484 217 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ESRRBO95718 433 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 MT-CO3P00414 261 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CHRNGP07510 517 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 EBLN1P0CF75 366 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 C1GALT1C1LP0DN25 315 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CHN1P15882 459 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 BGNP21810 368 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 GRK2P25098 689 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 MPSTP25325 297 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 GSTM2P28161 218 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 HNF4AP41235 474 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 TSPAN7P41732 249 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 MLLT3P42568 568 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 GCGRP47871 477 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CDH13P55290 713 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PKNOX1P55347 436 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CLDN6P56747 220 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ERVPABLB-1P60509 514 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 RPS15AP62244 130 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 IRF8Q02556 426 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 CHIT1Q13231 466 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 EIF3IQ13347 325 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 TSTA3Q13630 321 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 DOC2AQ14183 400 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 SLBPQ14493 270 aaKnown RBP eCLIP6.16□□□□□ -1.42
NCL-209ENST00000484328 PUM1Q14671 1186 aaKnown RBP eCLIP6.16□□□□□ -1.422e-74■□□□□ 9.3
NCL-209ENST00000484328 CHI3L2Q15782 390 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 XKR6Q5GH73 641 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 PAGE2BQ5JRK9 111 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 C10orf62Q5T681 223 aaPredicted RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 PHF19Q5T6S3 580 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 HHATQ5VTY9 493 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 LIPJQ5W064 366 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 LETMD1Q6P1Q0 360 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 FIGLAQ6QHK4 219 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 RNF165Q6ZSG1 346 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 ZCCHC23Q6ZST2 131 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 GPRIN3Q6ZVF9 776 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 RPS27LQ71UM5 84 aaKnown RBP6.16□□□□□ -1.42
NCL-209ENST00000484328 TMPRSS7Q7RTY8 843 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 VN1R5Q7Z5H4 357 aa6.16□□□□□ -1.42
NCL-209ENST00000484328 VN1R4Q7Z5H5 301 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms