RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SERTAD3Q9UJW9 196 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 B3GNT3Q9Y2A9 372 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 COPG1Q9Y678 874 aaKnown RBP9.59□□□□□ -0.87
CPSF4-213ENST00000484112 NFS1Q9Y697 457 aa9.59□□□□□ -0.87
CPSF4-213ENST00000484112 FAM95CA0A1B0GW59 222 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ARHGAP10A1A4S6 786 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 CCDC189A1A4V9 331 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ARHGEF33A8MVX0 844 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 C9J4A7 227 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 E7EQ34 232 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 MASP2O00187 686 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 PEX12O00623 359 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF749O43361 778 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 PRICKLE3O43900 615 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 C1QAP02745 245 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 CAPN1P07384 714 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ST6GAL1P15907 406 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ZNF37AP17032 561 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 HRH2P25021 359 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 MCM3P25205 808 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 SPRP35270 261 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 SLC26A3P40879 764 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 SLC12A2P55011 1212 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 CDKN2DP55273 166 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ABATP80404 500 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 NCF4Q15080 339 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 TRADDQ15628 312 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ZC3H12BQ5HYM0 836 aaKnown RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 RBM20Q5T481 1227 aaKnown RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 PAQR3Q6TCH7 311 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 UBE2R2Q712K3 238 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 TICAM1Q8IUC6 712 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 LMNTD1Q8N9Z9 388 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 CLEC1AQ8NC01 280 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 EEF1AKMT1Q8WVE0 214 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 ATL1Q8WXF7 558 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 FAM136AQ96C01 138 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 FER1L6-AS2Q96M78 137 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 CYTH2Q99418 400 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 GPR22Q99680 433 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 RBBP8Q99708 897 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 DPH2Q9BQC3 489 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 TRIM54Q9BYV2 358 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 SPHK1Q9NYA1 384 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 GPN3Q9UHW5 284 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 PADI2Q9Y2J8 665 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 PSAT1Q9Y617 370 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 AP1M2Q9Y6Q5 423 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
CPSF4-213ENST00000484112 UTP20O75691 2785 aaKnown RBP9.58□□□□□ -0.88
CPSF4-213ENST00000484112 RP1L1Q8IWN7 2480 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 SRPX2O60687 465 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 TSPAN12O95859 305 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 ALPPP05187 535 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PVRP15151 417 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 ECHS1P30084 290 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 CMPK1P30085 196 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PEBP1P30086 187 aaKnown RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 BDKRB1P46663 353 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PNLIPRP1P54315 467 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 CDKL1Q00532 357 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 SSPNQ14714 243 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 NAA30Q147X3 362 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 SF1Q15637 639 aaKnown RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 KBTBD12Q3ZCT8 623 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 C1orf189Q5VU69 101 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 YOD1Q5VVQ6 348 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 TLDC1Q6P9B6 456 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PIWIL4Q7Z3Z4 852 aaKnown RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 MRGPREQ86SM8 312 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 GPR135Q8IZ08 494 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 GALNT16Q8N428 558 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 ZADH2Q8N4Q0 377 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 OR2A1Q8NGT9 310 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 FBF1Q8TES7 1133 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 IFT81Q8WYA0 676 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 N4BP2L2Q92802 583 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 LINGO1Q96FE5 620 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PKP4Q99569 1192 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 NRTNQ99748 197 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 OLFM1Q99784 485 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 GPAMQ9HCL2 828 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 SMYD2Q9NRG4 433 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PLAGL1Q9UM63 463 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PLCL2Q9UPR0 1127 aa9.57□□□□□ -0.88
CPSF4-213ENST00000484112 PTRH2Q9Y3E5 179 aaKnown RBP9.57□□□□□ -0.88
CPSF4-213ENST00000484112 E7ENX8 843 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 LRRTM2O43300 516 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 SLC16A8O95907 504 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 CD63P08962 238 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 STMN1P16949 149 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ELAVL4P26378 380 aaKnown RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 RPA3P35244 121 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-213ENST00000484112 FOLR3P41439 243 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 HNMTP50135 292 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 FOXL2P58012 376 aa9.56□□□□□ -0.88
CPSF4-213ENST00000484112 ATP6V0D1P61421 351 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms