RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 COL4A2P08572 1712 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 SERTM1A2A2V5 107 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR52A4PA6NMU1 304 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 CASQ2O14958 399 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 KMOO15229 486 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 YY2O15391 372 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 AKAP10O43572 662 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PCNAP12004 261 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 ATP6V1C1P21283 382 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PSMB5P28074 263 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 OXTRP30559 389 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 HNF4AP41235 474 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR4D2P58180 307 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 RAE1P78406 368 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 FOXM1Q08050 763 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 RPA4Q13156 261 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLBPQ14493 270 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 CLCA4Q14CN2 919 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 SMAD2Q15796 467 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAPKAPK3Q16644 382 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 PRMT9Q6P2P2 845 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 UNC5DQ6UXZ4 953 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM102Q8N9M5 508 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 LINC01555Q8NAE3 123 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 RAD51AP1Q96B01 352 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 AURKBQ96GD4 344 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 HHIPQ96QV1 700 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR52E6Q96RD3 313 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 INPP5KQ9BT40 448 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 BTBD1Q9H0C5 482 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 OSGEPL1Q9H4B0 414 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 FGF22Q9HCT0 170 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 ITM2CQ9NQX7 267 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
CDC42SE1-204ENST00000483763 DYTNA2CJ06 578 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF839A8K0R7 811 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 SAP18O00422 153 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 ARPC2O15144 300 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 AXIN1O15169 862 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 SH3BP5O60239 455 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 GBAP04062 536 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 IL6P05231 212 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 GSNP06396 782 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 DRD1P21728 446 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 PTPN6P29350 595 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 CDKN2CP42773 168 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 TPMTP51580 245 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 AQP4P55087 323 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 RPS13P62277 151 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 PWP1Q13610 501 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 PYCR3Q53H96 274 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 CAPRIN2Q6IMN6 1127 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 ANKRD26P1Q6NSI1 321 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 KIAA1161Q6NSJ0 714 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 Q6ZS52 159 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 DCUN1D3Q8IWE4 304 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 C1orf52Q8N6N3 182 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 GLB1L3Q8NCI6 653 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 FLCNQ8NFG4 579 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPR156Q8NFN8 814 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR7A2PQ8NGA2 310 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 LRTOMTQ8WZ04 291 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 DNASE1L2Q92874 299 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 WDR34Q96EX3 536 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 RSRC1Q96IZ7 334 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 FCRL1Q96LA6 429 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 ECSITQ9BQ95 431 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 APOOQ9BUR5 198 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 SEMA6AQ9H2E6 1030 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 RPF2Q9H7B2 306 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 CCDC177Q9NQR7 707 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 PHPT1Q9NRX4 125 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 C6orf203Q9P0P8 240 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 MOSPD1Q9UJG1 213 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 AP4S1Q9Y587 144 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDHB14Q9Y5E9 798 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
CDC42SE1-204ENST00000483763 A0A1W2PPV9 198 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 KANSL1LA0AUZ9 987 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PIPSLA2A3N6 862 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRR19A6NJB7 356 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 KLHL18O94889 574 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TBX6O95947 436 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TGFB1P01137 390 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 NPPAP01160 153 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 C1GALT1C1LP0DN25 315 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ERGP11308 486 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 CDH1P12830 882 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACADSP16219 412 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 HRH2P25021 359 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 TEAD1P28347 426 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 CSTF3Q12996 717 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 UGT8Q16880 541 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 PGS1Q32NB8 556 aa8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 OGFRL1Q5TC84 451 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-204ENST00000483763 THEMIS2Q5TEJ8 643 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms