RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 DLEU7Q6UYE1 221 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 C17orf64Q86WR6 236 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 STMN2Q93045 179 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 TSACCQ96A04 125 aaPredicted RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 CCDC124Q96CT7 223 aaKnown RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 APOLD1Q96LR9 279 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 GPR174Q9BXC1 333 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 PITHD1Q9GZP4 211 aaPredicted RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 S100A14Q9HCY8 104 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 CMTM6Q9NX76 183 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 IGHV1OR15-9A0A0B4J2B8 117 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 A6NCN8 305 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 NME4O00746 187 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 PRMT3O60678 531 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 CDH1P12830 882 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 HSD17B1P14061 328 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 TACR1P25103 407 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 SLC7A2P52569 658 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 DGKQP52824 942 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 RPS13P62277 151 aaKnown RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 TSTA3Q13630 321 aaPredicted RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 NFYCQ13952 458 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 RCN1Q15293 331 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 THEMIS2Q5TEJ8 643 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 GALNT18Q6P9A2 607 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 C2orf73Q8N5S3 287 aaPredicted RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 FAM174AQ8TBP5 190 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 TMEM125Q96AQ2 219 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 CLDN23Q96B33 292 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 TESCQ96BS2 214 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 ASB9Q96DX5 294 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 TWSG1Q9GZX9 223 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 RHBGQ9H310 441 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 KIR3DX1Q9H7L2 352 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 DMRT3Q9NQL9 472 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 IMP3Q9NV31 184 aaKnown RBP13.53□□□□□ -0.24
CLK3-204ENST00000483723 TAC3Q9UHF0 121 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 BCAP29Q9UHQ4 241 aa13.53□□□□□ -0.24
CLK3-204ENST00000483723 A0A1W2PPC4 97 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 OR52A4PA6NMU1 304 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 H0Y3Z8 333 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 PCNAP12004 261 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 AK4P27144 223 aaPredicted RBP13.52□□□□□ -0.25
CLK3-204ENST00000483723 NDUFS1P28331 727 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.25
CLK3-204ENST00000483723 PHC1P78364 1004 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 PWP1Q13610 501 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 SLC2A7Q6PXP3 512 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 TMIGD1Q6UXZ0 262 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 NRROSQ86YC3 692 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 KRT78Q8N1N4 520 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 RNF148Q8N7C7 305 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 OR13H1Q8NG92 308 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 OR52E1Q8NGJ3 308 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 OR2A1Q8NGT9 310 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 GTF2H4Q92759 462 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 FOXQ1Q9C009 403 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 TMEM168Q9H0V1 697 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 NMRK1Q9NWW6 199 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 SLAMF8Q9P0V8 285 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 ZNF624Q9P2J8 865 aaPredicted RBP13.52□□□□□ -0.25
CLK3-204ENST00000483723 ADGRE2Q9UHX3 823 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 ICKQ9UPZ9 632 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.52□□□□□ -0.25
CLK3-204ENST00000483723 COLEC10Q9Y6Z7 277 aa13.52□□□□□ -0.25
CLK3-204ENST00000483723 EML2O95834 649 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 TNFP01375 233 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 PGRP06401 933 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 PRPS1L1P21108 318 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 CXCR2P25025 360 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 HNRNPFP52597 415 aaKnown RBP13.51□□□□□ -0.25
CLK3-204ENST00000483723 SLC34A1Q06495 639 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
CLK3-204ENST00000483723 ACSM2AQ08AH3 577 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
CLK3-204ENST00000483723 FAM174BQ3ZCQ3 159 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 SPIN4Q56A73 249 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 SPANXN4Q5MJ08 99 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 ACSM2BQ68CK6 577 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 NANOGP8Q6NSW7 305 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 VN1R5Q7Z5H4 357 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 HID1Q8IV36 788 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 KIAA2013Q8IYS2 634 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 GJD3Q8N144 294 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 SLC22A18ASQ8N1D0 253 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 FRMD1Q8N878 549 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 ZNF740Q8NDX6 193 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 CCL4L1Q8NHW4 92 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 GPBAR1Q8TDU6 330 aa13.51□□□□□ -0.25
CLK3-204ENST00000483723 SLC13A3Q8WWT9 602 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms