RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TCP11X1B4DZS4 312 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 DNALI1O14645 258 aaPredicted RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 HPP00738 406 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 TCP1P17987 556 aaKnown RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 FBLP22087 321 aaKnown RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 IMPA1P29218 277 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 RGS4P49798 205 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 SP140Q13342 867 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 CRB2Q5IJ48 1285 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 SPANXN3Q5MJ09 141 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 ATG9BQ674R7 924 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 UBE2R2Q712K3 238 aaPredicted RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 CNTN4Q8IWV2 1026 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 ARHGEF39Q8N4T4 335 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 METTL27Q8N6F8 245 aaPredicted RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 SNRNP40Q96DI7 357 aaKnown RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 BARD1Q99728 777 aaKnown RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 WDR77Q9BQA1 342 aaPredicted RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 TGIF2Q9GZN2 237 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 ILKAPQ9H0C8 392 aaPredicted RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 LUZP4Q9P127 313 aa18.9■□□□□ 0.62
HPS4-213ENST00000483631 TRMT6Q9UJA5 497 aaKnown RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 RUVBL1Q9Y265 456 aaKnown RBP18.9■□□□□ 0.62
HPS4-213ENST00000483631 MAP2K7O14733 419 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 SLC16A5O15375 505 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 C8GP07360 202 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 ACPPP15309 386 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 FDXRP22570 491 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 SLC26A3P40879 764 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 MPP1Q00013 466 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 TSTA3Q13630 321 aaPredicted RBP18.89■□□□□ 0.61
HPS4-213ENST00000483631 PRR30Q53SZ7 412 aaPredicted RBP18.89■□□□□ 0.61
HPS4-213ENST00000483631 CPNE9Q8IYJ1 553 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 DTWD1Q8N5C7 304 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 MCOLN3Q8TDD5 553 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 THAP11Q96EK4 314 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 CCDC138Q96M89 665 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 MKKSQ9NPJ1 570 aaPredicted RBP18.89■□□□□ 0.61
HPS4-213ENST00000483631 CCDC177Q9NQR7 707 aaPredicted RBP18.89■□□□□ 0.61
HPS4-213ENST00000483631 IARS2Q9NSE4 1012 aaKnown RBP18.89■□□□□ 0.61
HPS4-213ENST00000483631 TMEM184CQ9NVA4 438 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 TAS2R13Q9NYV9 303 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 ASIC3Q9UHC3 531 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 C3orf18Q9UK00 162 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 PCDHGA10Q9Y5H3 936 aa18.89■□□□□ 0.61
HPS4-213ENST00000483631 KCNE1BA0A087WTH5 132 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 AGFG2O95081 481 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 SYF2O95926 243 aaKnown RBP18.88■□□□□ 0.61
HPS4-213ENST00000483631 CYC1P08574 325 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 CCND1P24385 295 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 NDUFA9Q16795 377 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 B3GNTL1Q67FW5 361 aaPredicted RBP18.88■□□□□ 0.61
HPS4-213ENST00000483631 SHISA6Q6ZSJ9 500 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 SYDE1Q6ZW31 735 aaPredicted RBP18.88■□□□□ 0.61
HPS4-213ENST00000483631 PPFIBP2Q8ND30 876 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 RUNDC3BQ96NL0 473 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 LMF1Q96S06 567 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 FAM129AQ9BZQ8 928 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 DRC3Q9H069 523 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 EPS8L2Q9H6S3 715 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 LRRC4CQ9HCJ2 640 aa18.88■□□□□ 0.61
HPS4-213ENST00000483631 CORO1CQ9ULV4 474 aaPredicted RBP18.88■□□□□ 0.61
HPS4-213ENST00000483631 MASP2O00187 686 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 ANXA5P08758 320 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 RPS15AP62244 130 aaKnown RBP18.87■□□□□ 0.61
HPS4-213ENST00000483631 DHX9Q08211 1270 aaKnown RBP18.87■□□□□ 0.61
HPS4-213ENST00000483631 HKDC1Q2TB90 917 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 THEMIS2Q5TEJ8 643 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 NDUFAF7Q7L592 441 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 PIWIL4Q7Z3Z4 852 aaKnown RBP18.87■□□□□ 0.61
HPS4-213ENST00000483631 PALM2Q8IXS6 379 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 AMER3Q8N944 861 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 SSC4DQ8WTU2 575 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 DDX47Q9H0S4 455 aaKnown RBP18.87■□□□□ 0.61
HPS4-213ENST00000483631 SYNPO2LQ9H987 977 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 GRPEL1Q9HAV7 217 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 PARVBQ9HBI1 364 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 ZBTB20Q9HC78 741 aaPredicted RBP18.87■□□□□ 0.61
HPS4-213ENST00000483631 STOX2Q9P2F5 926 aaPredicted RBP18.87■□□□□ 0.61
HPS4-213ENST00000483631 TRPC4Q9UBN4 977 aa18.87■□□□□ 0.61
HPS4-213ENST00000483631 DOPEY1Q5JWR5 2465 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 BLACEA4D250 179 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 IDSB3KWA1 339 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 H0YIG0 161 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 HAT1O14929 419 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 FOXS1O43638 330 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 CBX6O95503 412 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 DDAH2O95865 285 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 F7P08709 466 aaPredicted RBP18.86■□□□□ 0.61
HPS4-213ENST00000483631 CXCR2P25025 360 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 IVDP26440 423 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 TSFMP43897 325 aaKnown RBP18.86■□□□□ 0.61
HPS4-213ENST00000483631 EMP2P54851 167 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 AP2B1P63010 937 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 TIAL1Q01085 375 aaKnown RBP eCLIP18.86■□□□□ 0.61
HPS4-213ENST00000483631 MORF4L2Q15014 288 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 VWA2Q5GFL6 755 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 ISLR2Q6UXK2 745 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 ADCK2Q7Z695 626 aa18.86■□□□□ 0.61
HPS4-213ENST00000483631 CUZD1Q86UP6 607 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms