RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 TAC3Q9UHF0 121 aa9.26□□□□□ -0.93
TMEM39A-207ENST00000482162 CDC14AQ9UNH5 594 aa9.26□□□□□ -0.93
TMEM39A-207ENST00000482162 TEX264Q9Y6I9 313 aa9.26□□□□□ -0.93
TMEM39A-207ENST00000482162 MDC1Q14676 2089 aaKnown RBP9.26□□□□□ -0.93
TMEM39A-207ENST00000482162 LOC102723996A0A087X1L8 192 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 TCP11X1B4DZS4 312 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 TXNDC9O14530 226 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PCDH17O14917 1159 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 SLC16A5O15375 505 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 VPS26AO75436 327 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CCNDBP1O95273 360 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CBX6O95503 412 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 ERVK-10P10266 1014 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 UQCRFS1P47985 274 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CARSP49589 748 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CDKN2DP55273 166 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 SNRPNP63162 240 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 KLC1Q07866 573 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CUL1Q13616 776 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 MORF4L2Q15014 288 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PRR30Q53SZ7 412 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 TEDDM1Q5T9Z0 273 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 STEAP4Q687X5 459 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 HIBCHQ6NVY1 386 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PAQR3Q6TCH7 311 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PIWIL4Q7Z3Z4 852 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 VN1R4Q7Z5H5 301 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CPNE9Q8IYJ1 553 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CSNK1A1LQ8N752 337 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 EEF1AKMT1Q8WVE0 214 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PSMF1Q92530 271 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 LRRC39Q96DD0 335 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 SNRNP40Q96DI7 357 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 TM4SF19Q96DZ7 209 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PDLIM5Q96HC4 596 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CCDC138Q96M89 665 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 LMF1Q96S06 567 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 MESP1Q9BRJ9 268 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 SARGQ9BW04 601 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 SGPP1Q9BX95 441 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PCBD2Q9H0N5 130 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CCDC68Q9H2F9 335 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PARVBQ9HBI1 364 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 IARS2Q9NSE4 1012 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 TAS2R13Q9NYV9 303 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 STOX2Q9P2F5 926 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 TSR3Q9UJK0 312 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 CDC23Q9UJX2 597 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 ADAMTS6Q9UKP5 1117 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PDE10AQ9Y233 779 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 RUVBL1Q9Y265 456 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 PCDHGA10Q9Y5H3 936 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 MAU2Q9Y6X3 613 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 DOPEY1Q5JWR5 2465 aa9.25□□□□□ -0.93
TMEM39A-207ENST00000482162 WIPF3A6NGB9 483 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 USP27XA6NNY8 438 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 H7BY64 318 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 FANCGO15287 622 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 VPS4BO75351 444 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 BANF1O75531 89 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 HPP00738 406 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 EIF2S1P05198 315 aaKnown RBP9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 C8GP07360 202 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 NPPBP16860 134 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 GNLYP22749 145 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 EFNA3P52797 238 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 CSNK1G2P78368 415 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 OCA2Q04671 838 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 SP140Q13342 867 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 RAPSNQ13702 412 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 PPP1R7Q15435 360 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 HKDC1Q2TB90 917 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 VWA2Q5GFL6 755 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 RBM20Q5T481 1227 aaKnown RBP9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 UGT3A1Q6NUS8 523 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 TMEM205Q6UW68 189 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 SHISA6Q6ZSJ9 500 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 UBE2R2Q712K3 238 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 CUZD1Q86UP6 607 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 METTL27Q8N6F8 245 aaPredicted RBP9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 EFCAB3Q8N7B9 438 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 PPFIBP2Q8ND30 876 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 ABHD11Q8NFV4 315 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 OR4K1Q8NGD4 311 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 MCOLN3Q8TDD5 553 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 TM9SF4Q92544 642 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 C19orf60Q96EN9 201 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 CERS2Q96G23 380 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 VPS50Q96JG6 964 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 PRAP1Q96NZ9 151 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 NDNQ99608 321 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 MCMBPQ9BTE3 642 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 CRB3Q9BUF7 120 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 FAM129AQ9BZQ8 928 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 LHPPQ9H008 270 aa9.24□□□□□ -0.93
TMEM39A-207ENST00000482162 SOX17Q9H6I2 414 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms