RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 FUCA1P04066 466 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 BCKDHAP12694 445 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 EFNA1P20827 205 aaPredicted RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 PHC1P78364 1004 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 IRF8Q02556 426 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 CATSPEREQ5SY80 951 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 CES5AQ6NT32 575 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 DLEU7Q6UYE1 221 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 PATL1Q86TB9 770 aaKnown RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 RASGRP3Q8IV61 690 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 NRSN1Q8IZ57 195 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 B4GALNT2Q8NHY0 566 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 ZNF480Q8WV37 535 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 NEIL2Q969S2 332 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 AURKBQ96GD4 344 aaPredicted RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 CDCA3Q99618 268 aaPredicted RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 VAPAQ9P0L0 249 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 ZNF701M0R085 212 aaPredicted RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 EIF3FO00303 357 aaPredicted RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 KPNA5O15131 536 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 DFNA5O60443 496 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 C1orf105O95561 183 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 APODP05090 189 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 CDH1P12830 882 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 KIR2DL1P43626 348 aaPredicted RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 HNMTP50135 292 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 HPCAP84074 193 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 SP140Q13342 867 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 ADAM15Q13444 863 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 DOC2AQ14183 400 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 DUS1LQ6P1R4 473 aaKnown RBP13.98□□□□□ -0.17
CHD3-211ENST00000481999 TMEM184AQ6ZMB5 413 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 SYTL1Q8IYJ3 562 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 GLMNQ92990 594 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 ACAT2Q9BWD1 397 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 CHID1Q9BWS9 393 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 CKAP5Q14008 2032 aa13.98□□□□□ -0.17
CHD3-211ENST00000481999 PCM1Q15154 2024 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 H3BQ06 376 aaPredicted RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 SEC24DO94855 1032 aaPredicted RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 AP1S2P56377 157 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 OR4D2P58180 307 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 DCTN2Q13561 401 aaKnown RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 COL9A2Q14055 689 aaPredicted RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 USP39Q53GS9 565 aaKnown RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 CYBRD1Q53TN4 286 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 GLYATQ6IB77 296 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 C10orf111Q8N326 155 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 OR5AR1Q8NGP9 310 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 CDC26Q8NHZ8 85 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 MAGEE2Q8TD90 523 aaPredicted RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 FBXL20Q96IG2 436 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 PPP3R2Q96LZ3 170 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 SEPHS2Q99611 448 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 SPNS1Q9H2V7 528 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 C1orf109Q9NX04 203 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 ZFR2Q9UPR6 939 aaKnown RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 KRT6AP02538 564 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 KRT6BP04259 564 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 GSNP06396 782 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 JAK1P23458 1154 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 KRT6CP48668 564 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 TBPL1P62380 186 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 TMEM196Q5HYL7 178 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 FRG2Q64ET8 278 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 ANKRD26P1Q6NSI1 321 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 TMPRSS11BQ86T26 416 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 FAM124AQ86V42 546 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 GANCQ8TET4 914 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 GAB3Q8WWW8 586 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 ELSPBP1Q96BH3 223 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 FBXL8Q96CD0 374 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 VPS50Q96JG6 964 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 RNF145Q96MT1 663 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 FRG2BQ96QU4 278 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 CGREF1Q99674 301 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 YTHDF1Q9BYJ9 559 aaKnown RBP13.97□□□□□ -0.17
CHD3-211ENST00000481999 RAD18Q9NS91 495 aa13.97□□□□□ -0.17
CHD3-211ENST00000481999 CATP04040 527 aaKnown RBP13.96□□□□□ -0.17
CHD3-211ENST00000481999 GBAP04062 536 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 COL9A1P20849 921 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 CD72P21854 359 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 TTKP33981 857 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 CDK3Q00526 305 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 DPTQ07507 201 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 PWP1Q13610 501 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 PNCKQ6P2M8 343 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 CLVS1Q8IUQ0 354 aaPredicted RBP13.96□□□□□ -0.17
CHD3-211ENST00000481999 OR8J3Q8NGG0 315 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 HDAC8Q9BY41 377 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 PPT2Q9UMR5 302 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 PLEKHM1Q9Y4G2 1056 aa13.96□□□□□ -0.17
CHD3-211ENST00000481999 MAGEB17A8MXT2 336 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 H0YAE9 185 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 SLC28A1O00337 649 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 SAP18O00422 153 aaKnown RBP13.96□□□□□ -0.18
CHD3-211ENST00000481999 ADAM23O75077 832 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 GMNNO75496 209 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms