RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 SLC28A1O00337 649 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 FFAR3O14843 346 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 PPM1DO15297 605 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GPR42O15529 346 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 RGS14O43566 566 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 UBXN7O94888 489 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 UGT2B7P16662 529 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 VARSP26640 1264 aaKnown RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 SERPINB3P29508 390 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GRK3P35626 688 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 HTR6P50406 440 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GPLD1P80108 840 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 NR0B2Q15466 257 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 SF1Q15637 639 aaKnown RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 SLC9B1Q4ZJI4 515 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 TCHHL1Q5QJ38 904 aaPredicted RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 CATSPEREQ5SY80 951 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 VWA5B1Q5TIE3 1220 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 SPESP1Q6UW49 350 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 TRIM46Q7Z4K8 759 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GATAD2AQ86YP4 633 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 MINDY1Q8N5J2 469 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 TTLQ8NG68 377 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 OR4K1Q8NGD4 311 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 CEP70Q8NHQ1 597 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 WDR20Q8TBZ3 569 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 SELENOMQ8WWX9 145 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 NAT6Q93015 286 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 NRTNQ99748 197 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 SARGQ9BW04 601 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 RAB33BQ9H082 229 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 TUBB1Q9H4B7 451 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 BRF2Q9HAW0 419 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 IL21RQ9HBE5 538 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 SLC6A20Q9NP91 592 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 TMEM184CQ9NVA4 438 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 DNAAF2Q9NVR5 837 aaKnown RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 CUEDC1Q9NWM3 386 aaPredicted RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 HRASLS2Q9NWW9 162 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GEMIN8Q9NWZ8 242 aaKnown RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 ADGRE2Q9UHX3 823 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 POMT2Q9UKY4 750 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 PPT2Q9UMR5 302 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 RNF215Q9Y6U7 377 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 COL5A1P20908 1838 aaPredicted RBP12.11□□□□□ -0.47
SIK3-209ENST00000480222 PCM1Q15154 2024 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SPTBN4Q9H254 2564 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 GOLGA8QA0A0J9YX86 632 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 A0A0J9YY10 115 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 TRBC2A0A5B9 178 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 LNP1A1A4G5 178 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 GOLGA8OA6NCC3 632 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 GOLGA8NF8WBI6 632 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 CCDC22O60826 627 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 LRP3O75074 770 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 RSL1D1O76021 490 aaKnown RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 PROS1P07225 676 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SERPINA6P08185 405 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 PRR35P0CG20 571 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 AMD1P17707 334 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 POLR2CP19387 275 aaPredicted RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 PRPH2P23942 346 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 EPHA3P29320 983 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 PIK3CBP42338 1070 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SF3A3Q12874 501 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■■■■□ 23.5
SIK3-209ENST00000480222 TUBB3Q13509 450 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 ABRAXAS2Q15018 415 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 IMPG1Q17R60 797 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SMU1Q2TAY7 513 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 OGFOD2Q6N063 350 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 ZNF761Q86XN6 746 aaPredicted RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 CARFQ8N187 725 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SUMF1Q8NBK3 374 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 OR7G3Q8NG95 312 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 ATOH1Q92858 354 aaPredicted RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 TUBGCP3Q96CW5 907 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 METTL2AQ96IZ6 378 aaKnown RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 PPP3R2Q96LZ3 170 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 LRRC37BQ96QE4 947 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 OR2A14Q96R47 310 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 CD180Q99467 661 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 LRIT1Q9P2V4 623 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 ZNF490Q9ULM2 529 aaPredicted RBP12.1□□□□□ -0.47
SIK3-209ENST00000480222 PADI4Q9UM07 663 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 SNX7Q9UNH6 387 aa12.1□□□□□ -0.47
SIK3-209ENST00000480222 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
SIK3-209ENST00000480222 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
SIK3-209ENST00000480222 IGKV1-8A0A0C4DH67 115 aa12.09□□□□□ -0.47
SIK3-209ENST00000480222 FOXE1O00358 373 aaPredicted RBP12.09□□□□□ -0.47
SIK3-209ENST00000480222 TRIM38O00635 465 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms