RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MUM1Q2TAK8 710 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 TUBB8Q3ZCM7 444 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 PLEKHN1Q494U1 663 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-218ENST00000479554 IRAK1BP1Q5VVH5 260 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 OR4N4Q8N0Y3 316 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 ZADH2Q8N4Q0 377 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 GIMAP7Q8NHV1 300 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 CALML6Q8TD86 181 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 KCNJ9Q92806 393 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 VPS50Q96JG6 964 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 PKP4Q99569 1192 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 PLCD4Q9BRC7 762 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 CRB3Q9BUF7 120 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 TRIM31Q9BZY9 425 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 VIPAS39Q9H9C1 493 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 SEMA3GQ9NS98 782 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 C20orf96Q9NUD7 363 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-218ENST00000479554 KLHL42Q9P2K6 505 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 TAC3Q9UHF0 121 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
ATG4B-218ENST00000479554 SHANK1Q9Y566 2161 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 VSTM2BA6NLU5 285 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 SLC16A8O95907 504 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 SYF2O95926 243 aaKnown RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 MPC1LP0DKB6 136 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 GP1BBP13224 206 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 ENO3P13929 434 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 FBLP22087 321 aaKnown RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 MAGEA3P43357 314 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 OCA2Q04671 838 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 TRADDQ15628 312 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 ICE2Q659A1 982 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF549Q6P9A3 640 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 PPIL6Q8IXY8 311 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 AGGF1Q8N302 714 aaeCLIP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 CSNK1A1LQ8N752 337 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 FBXO15Q8NCQ5 510 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 PPFIBP2Q8ND30 876 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 STT3BQ8TCJ2 826 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 MIEF2Q96C03 454 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 CABS1Q96KC9 395 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 C10orf90Q96M02 699 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 GPR21Q99679 349 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 ACBD3Q9H3P7 528 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 LRRC4CQ9HCJ2 640 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 UTP6Q9NYH9 597 aaKnown RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 WHRNQ9P202 907 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 STOX2Q9P2F5 926 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF282Q9UDV7 671 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-218ENST00000479554 MED16Q9Y2X0 877 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 COMMD10Q9Y6G5 202 aa13.67□□□□□ -0.22
ATG4B-218ENST00000479554 IGKV1-8A0A0C4DH67 115 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 TCP11X1B4DZS4 312 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 H0YGG7 62 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 SMAPO00193 183 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 PRPF4O43172 522 aaKnown RBP eCLIP13.66□□□□□ -0.222e-20■■■■■ 64.6
ATG4B-218ENST00000479554 SASH3O75995 380 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 EZRP15311 586 aaKnown RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ECHS1P30084 290 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ARF3P61204 181 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 MPP1Q00013 466 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 PRDX1Q06830 199 aaKnown RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 KLC1Q07866 573 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 PRTGQ2VWP7 1150 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 FBXO42Q6P3S6 717 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 KIRREL2Q6UWL6 708 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ADCK2Q7Z695 626 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 PRSS58Q8IYP2 241 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 MREGQ8N565 214 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 BBOF1Q8ND07 529 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 CD200R1Q8TD46 325 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF480Q8WV37 535 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 INPP5DQ92835 1189 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 RERGQ96A58 199 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 C19orf60Q96EN9 201 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 SIGLEC10Q96LC7 697 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 PSMG3-AS1Q96PY0 264 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 FAM167BQ9BTA0 163 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 GRHL1Q9NZI5 618 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ASIC3Q9UHC3 531 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 FBXO5Q9UKT4 447 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 DHRS7Q9Y394 339 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 ANKRD12Q6UB98 2062 aa13.66□□□□□ -0.22
ATG4B-218ENST00000479554 NAV2Q8IVL1 2488 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 E7ENX8 843 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 NDC80O14777 642 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ZBTB14O43829 449 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms