RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KIR3DL1P43629 444 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 TMBIM6P55061 237 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 VBP1P61758 197 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 EMX1Q04741 257 aaPredicted RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 LY6G5CQ5SRR4 150 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 MPP7Q5T2T1 576 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 TMEM236Q5W0B7 351 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 CPZQ66K79 652 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 PDE12Q6L8Q7 609 aaKnown RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 Q6ZPB1 254 aaPredicted RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 ANKRD33Q7Z3H0 272 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 SPRED2Q7Z698 418 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 PTOV1Q86YD1 416 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ADHFE1Q8IWW8 467 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ZCCHC7Q8N3Z6 543 aaKnown RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 L3MBTL4Q8NA19 623 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ABHD11Q8NFV4 315 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 OR5K1Q8NHB7 308 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 HDAC2Q92769 488 aaKnown RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 CMTM7Q96FZ5 175 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ZSWIM3Q96MP5 696 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 YME1L1Q96TA2 773 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 RAD21L1Q9H4I0 556 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 PNMA8BQ9ULN7 279 aaPredicted RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 SH2B3Q9UQQ2 575 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 MAN2B2Q9Y2E5 1009 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ZNF510Q9Y2H8 683 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 COQ6Q9Y2Z9 468 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 PPIL1Q9Y3C6 166 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 SZT2Q5T011 3432 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 PLK4O00444 970 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 FKTNO75072 461 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 CLPXO76031 633 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 RETP07949 1114 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 COX7A2P14406 83 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 IGFBP5P24593 272 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 ERVFC1P60507 584 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 GRSF1Q12849 480 aaKnown RBP eCLIP10.46□□□□□ -0.74
VPS52-217ENST00000478934 CDK5R2Q13319 367 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 GRIN2CQ14957 1233 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 MOGQ16653 247 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 HKDC1Q2TB90 917 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 CYP27C1Q4G0S4 372 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 RBM48Q5RL73 367 aaKnown RBP10.46□□□□□ -0.74
VPS52-217ENST00000478934 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 THOC6Q86W42 341 aaKnown RBP10.46□□□□□ -0.74
VPS52-217ENST00000478934 AADATQ8N5Z0 425 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 RASGEF1AQ8N9B8 481 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 MCOLN3Q8TDD5 553 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 NRBF2Q96F24 287 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 REXO5Q96IC2 774 aaKnown RBP10.46□□□□□ -0.74
VPS52-217ENST00000478934 TPD52L3Q96J77 140 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 WRAP53Q9BUR4 548 aaKnown RBP10.46□□□□□ -0.74
VPS52-217ENST00000478934 PAK6Q9NQU5 681 aaPredicted RBP10.46□□□□□ -0.74
VPS52-217ENST00000478934 TRNAU1APQ9NX07 287 aaKnown RBP10.46□□□□□ -0.74
VPS52-217ENST00000478934 SIRT5Q9NXA8 310 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 SLC25A13Q9UJS0 675 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 SNX5Q9Y5X3 404 aa10.46□□□□□ -0.74
VPS52-217ENST00000478934 CFAP99D6REC4 459 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 GRM6O15303 877 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ANGPTL1O95841 491 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 FADS2O95864 444 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 SLC16A8O95907 504 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 HPRP00739 348 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 C8GP07360 202 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 CTSAP10619 480 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 PRPS2P11908 318 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 CCL5P13501 91 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 TIMP2P16035 220 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 PCMT1P22061 227 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 FUT4P22083 530 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 CLK3P49761 638 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 CRYBA2P53672 197 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 WDR5P61964 334 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 MEF2AQ02078 507 aaPredicted RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 SMU1Q2TAY7 513 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ZNF691Q5VV52 312 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 EGFLAMQ63HQ2 1017 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ZNF852Q6ZMS4 543 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ZZZ3Q8IYH5 903 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 KLHL23Q8NBE8 558 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 RAB2BQ8WUD1 216 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 RPL3LQ92901 407 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 COX4I2Q96KJ9 171 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 TUBA1CQ9BQE3 449 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 YTHDF1Q9BYJ9 559 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 RMND5AQ9H871 391 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 CHCHD3Q9NX63 227 aaKnown RBP10.45□□□□□ -0.74
VPS52-217ENST00000478934 C3orf18Q9UK00 162 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 FUOMA2VDF0 154 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 GABRR3A8MPY1 467 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 WNT9AO14904 365 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 FKBP9O95302 570 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 JUPP14923 745 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 CYP2A7P20853 494 aa10.45□□□□□ -0.74
VPS52-217ENST00000478934 RAE1P78406 368 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms