RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ABCA10Q8WWZ4 1543 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 GLYATL1P3A0A0U1RQE8 302 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ADAMTS4O75173 837 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PSMG1O95456 288 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 GPIP06744 558 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 F2RL1P55085 397 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 UBE2NP61088 152 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 CLINT1Q14677 625 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 UPP1Q16831 310 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 GCNT6Q5T4J0 391 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 IL27RAQ6UWB1 636 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 RASGRP3Q8IV61 690 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 REXO1L1PQ8IX06 675 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 KIAA0319LQ8IZA0 1049 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 FUKQ8N0W3 1084 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PSD4Q8NDX1 1056 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR7G2Q8NG99 324 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR8H1Q8NGG4 311 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CPA5Q8WXQ8 436 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 BOD1Q96IK1 185 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MCEEQ96PE7 176 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ACP6Q9NPH0 428 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ALKBH4Q9NXW9 302 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PCDHA6Q9UN73 950 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PCDHA8Q9Y5H6 950 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 A0A1W2PQJ5 194 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 KLRG2A4D1S0 409 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 C1orf196B1AJZ1 125 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 KHNYNO15037 678 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 CHRM5P08912 532 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 TGFB3P10600 412 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 TUBG1P23258 451 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR1E1P30953 314 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SCTRP47872 440 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CLRN1P58418 232 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SRPXP78539 464 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 MAMLD1Q13495 774 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 HES5Q5TA89 166 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ATPAF1Q5TC12 328 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 LEG1Q6P5S2 330 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 RALGPS2Q86X27 583 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 GLB1L3Q8NCI6 653 aaPredicted RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 NFKBIDQ8NI38 313 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 FAM136AQ96C01 138 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ISCUQ9H1K1 167 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 GOLGA2P5Q9HBQ8 144 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 BTG4Q9NY30 223 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CPNE7Q9UBL6 633 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SUSD2Q9UGT4 822 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 PRPF19Q9UMS4 504 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 OVOS2A0A0G2JMS6 1433 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OVOS2A0A0J9YW53 1432 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OVOS2Q6IE36 1432 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 GRM6O15303 877 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 BRINP1O60477 761 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 HGFP14210 728 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ETS2P15036 469 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 IDH2P48735 452 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 RHBDL3P58872 404 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 RCAN2Q14206 197 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 DOK7Q18PE1 504 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 TMEM41BQ5BJD5 291 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OVOS1Q6IE37 1185 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 KIAA1324Q6UXG2 1013 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 ERMP1Q7Z2K6 904 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR2M3Q8NG83 312 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OR1J2Q8NGS2 313 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 FBXO30Q8TB52 745 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 OSTF1Q92882 214 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SLC47A1Q96FL8 570 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 DCLRE1CQ96SD1 692 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 TBL1YQ9BQ87 522 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF649Q9BS31 505 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZDHHC5Q9C0B5 715 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 CRISPLD2Q9H0B8 497 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ARNT2Q9HBZ2 717 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SLC2A4RGQ9NR83 387 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 ZNF226Q9NYT6 803 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 SLC17A6Q9P2U8 582 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
USF3-202ENST00000478658 SPEF2Q9C093 1822 aa5.31□□□□□ -1.56
USF3-202ENST00000478658 LRRC30A6NM36 301 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 AP5Z1O43299 807 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PRAMEF2O60811 474 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 HAPLN1P10915 354 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 PRCPP42785 496 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 HERVK_113P62684 666 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ERVK-24P63145 666 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ACTG2P63267 376 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 DEFA5Q01523 94 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 ENPP2Q13822 863 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 SLX4IPQ5VYV7 408 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 C16orf59Q7L2K0 433 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 TMCO2Q7Z6W1 182 aaPredicted RBP5.3□□□□□ -1.56
USF3-202ENST00000478658 KIF2BQ8N4N8 673 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 RNF149Q8NC42 400 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 PLA2G15Q8NCC3 412 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 GSTCDQ8NEC7 633 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 OR11L1Q8NGX0 322 aa5.3□□□□□ -1.56
USF3-202ENST00000478658 C3orf30Q96M34 536 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms