RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 DRD2P14416 443 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 AOAHP28039 575 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 CD96P40200 585 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 BDKRB1P46663 353 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 HADHBP55084 474 aaKnown RBP19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 YBX1P67809 324 aaKnown RBP19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 SYT16Q17RD7 645 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 CCSMST1Q4G0I0 132 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 AFTPHQ6ULP2 937 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 FGD2Q7Z6J4 655 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 LUZP1Q86V48 1076 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 TMEM200AQ86VY9 491 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 DNAAF3Q8N9W5 541 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 FAM98AQ8NCA5 519 aaKnown RBP19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 CHDHQ8NE62 594 aaPredicted RBP19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 METTL21AQ8WXB1 218 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 KRT35Q92764 455 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 FOXC2Q99958 501 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 FAM118BQ9BPY3 351 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 VN1R1Q9GZP7 353 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 ZNHIT6Q9NWK9 470 aaKnown RBP19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 ANKRD10Q9NXR5 420 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 MRFAP1Q9Y605 127 aa19.14■□□□□ 0.65
PDLIM1-202ENST00000477757 A0A0A6YYC8 382 aaPredicted RBP19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 IGHV3-20A0A0C4DH32 117 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 A0A0U1RQJ8 604 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 IQCF5A8MTL0 148 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 I3L1I5 382 aaPredicted RBP19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 C1orf105O95561 183 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 ZNF24P17028 368 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 CMPK1P30085 196 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 IST1P53990 364 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 COPS2P61201 443 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 TFF3Q07654 80 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 MEP1AQ16819 746 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 LANCL3Q6ZV70 420 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 GALNTL5Q7Z4T8 443 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 CPEB2Q7Z5Q1 589 aaKnown RBP19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 CRLF3Q8IUI8 442 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 CCDC42Q96M95 316 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 NPAS2Q99743 824 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 PLCD4Q9BRC7 762 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 SPATA7Q9P0W8 599 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 C19orf25Q9UFG5 118 aaPredicted RBP19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 EFR3BQ9Y2G0 817 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 NFS1Q9Y697 457 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 SCN2AQ99250 2005 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 GTF3C1Q12789 2109 aa19.13■□□□□ 0.65
PDLIM1-202ENST00000477757 GOLGA6L22H0YM25 854 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 ZNF189O75820 626 aaPredicted RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 GOT2P00505 430 aaKnown RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 KLK2P20151 261 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 CTNNA2P26232 953 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 MAT1AQ00266 395 aaKnown RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 FASTKQ14296 549 aaKnown RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 PARP6Q2NL67 630 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 CCDC38Q502W7 563 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 SPINK14Q6IE38 97 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 LRRC8BQ6P9F7 803 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 DMRTC2Q8IXT2 367 aaPredicted RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 MARVELD2Q8N4S9 558 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 HDAC10Q969S8 669 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 CHP1Q99653 195 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 ZNF559Q9BR84 538 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 NHEJ1Q9H9Q4 299 aaPredicted RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 KCNK13Q9HB14 408 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 IFNKQ9P0W0 207 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 KCNN3Q9UGI6 736 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 TTC7AQ9ULT0 858 aaPredicted RBP19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 HCFC1P51610 2035 aa19.12■□□□□ 0.65
PDLIM1-202ENST00000477757 PRRC2AP48634 2157 aaKnown RBP19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 MAN1A2O60476 641 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 NEURL1O76050 574 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 SUN1O94901 812 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 METTL18O95568 372 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 SP1P08047 785 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 MSX1P28360 303 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 PTPN7P35236 360 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 CCNFP41002 786 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 SEMA3AQ14563 771 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 ZNF534Q76KX8 674 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 PAQR7Q86WK9 346 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 KRT222Q8N1A0 295 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 HORMAD2Q8N7B1 307 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 GSDMBQ8TAX9 411 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 ASB5Q8WWX0 329 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 NRGNQ92686 78 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 NINJ1Q92982 152 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 OR2A5Q96R48 311 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 ACAT2Q9BWD1 397 aa19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 RUVBL2Q9Y230 463 aaKnown RBP19.11■□□□□ 0.65
PDLIM1-202ENST00000477757 INTS1Q8N201 2190 aaKnown RBP19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 IGKV1-8A0A0C4DH67 115 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 GABRR3A8MPY1 467 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 CHRNB4P30926 498 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 ST13P50502 369 aaKnown RBP19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 PPP2R2AP63151 447 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 FOLH1Q04609 750 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms