RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 IRGMA1A4Y4 181 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 CLDN25C9JDP6 229 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ADAM12O43184 909 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 TGM5O43548 720 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 MMP20O60882 483 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 C9P02748 559 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 KLK1P06870 262 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 RHOP08100 348 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 HSD3B1P14060 373 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 HSD3B2P26439 372 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ARNTP27540 789 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 PRDX3P30048 256 aaKnown RBP14.2□□□□□ -0.14
HDAC6-220ENST00000477528 NPTX1Q15818 432 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 PAGE3Q5JUK9 113 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 FAM124AQ86V42 546 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 POC5Q8NA72 575 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 MUS81Q96NY9 551 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 CSF2RAP15509 400 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 CASP9P55211 416 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ARF5P84085 180 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 TUBB3Q13509 450 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 SLC39A11Q8N1S5 342 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 DPP10Q8N608 796 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 OR10Q1Q8NGQ4 319 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 OR10G6Q8NH81 332 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 BPIFB1Q8TDL5 484 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 RNFT2Q96EX2 444 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 RNF38Q9H0F5 515 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 NOL6Q9H6R4 1146 aaKnown RBP14.2□□□□□ -0.14
HDAC6-220ENST00000477528 SMOXQ9NWM0 555 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 HCSTQ9UBK5 93 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 AIREO43918 545 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ABCB7O75027 752 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ALOX5P09917 674 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 POU2F1P14859 743 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 GGT1P19440 569 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 PRKACGP22612 351 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 PLA2G16P53816 162 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 DSTNP60981 165 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 CDKL4Q5MAI5 379 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 ATAT1Q5SQI0 421 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 TNFAIP8L2Q6P589 184 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-220ENST00000477528 C12orf43Q96C57 262 aaKnown RBP14.2□□□□□ -0.14
HDAC6-220ENST00000477528 RHBDF1Q96CC6 855 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
HDAC6-220ENST00000477528 SLC35G5Q96KT7 338 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 EQTNQ9NQ60 294 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 RIMS3Q9UJD0 308 aa14.2□□□□□ -0.14
HDAC6-220ENST00000477528 TCRBV3S1A0A5B6 114 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 SMAD6O43541 496 aaKnown RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 CDH3P22223 829 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 TTLQ8NG68 377 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 POF1BQ8WVV4 589 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 GEMIN6Q8WXD5 167 aaKnown RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 CRISPLD1Q9H336 500 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 WDR26Q9H7D7 661 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 PRDM8Q9NQV8 689 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 A0A0U1RQS6 177 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 BMP7P18075 431 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 ERVK-21P61565 698 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 ZNF763Q0D2J5 394 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 TUBA3CQ13748 450 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 RSBN1Q5VWQ0 802 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 TMIGD1Q6UXZ0 262 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 ZNF420Q8TAQ5 688 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 SMPDL3AQ92484 453 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 TFGQ92734 400 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 HDAC2Q92769 488 aaKnown RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 SLC12A9Q9BXP2 914 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 SLC2A11Q9BYW1 496 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 MARCH5Q9NX47 278 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 BTBD3Q9Y2F9 522 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 PIPSLA2A3N6 862 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 IL7RP16871 459 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 PRR5P85299 388 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 CDK6Q00534 326 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 MVKQ03426 396 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 MEP1AQ16819 746 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 MPP7Q5T2T1 576 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 LIMS2Q7Z4I7 341 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 LGI4Q8N135 537 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 GJD3Q8N144 294 aa14.19□□□□□ -0.14
HDAC6-220ENST00000477528 GPATCH1Q9BRR8 931 aaKnown RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 THUMPD1Q9NXG2 353 aaKnown RBP14.19□□□□□ -0.14
HDAC6-220ENST00000477528 OPN1SWP03999 348 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 ALDOCP09972 364 aaKnown RBP14.18□□□□□ -0.14
HDAC6-220ENST00000477528 PFKLP17858 780 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 RTN4RL1Q86UN2 441 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-220ENST00000477528 HDDC3Q8N4P3 179 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 SLC38A4Q969I6 547 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 MAELQ96JY0 434 aaKnown RBP14.18□□□□□ -0.14
HDAC6-220ENST00000477528 COX4I2Q96KJ9 171 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 OR51B5Q9H339 312 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 OR10H2O60403 315 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 ZNF12P17014 697 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 VMACQ2NL98 169 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 ZNF554Q86TJ5 538 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 PDLIM5Q96HC4 596 aaKnown RBP14.18□□□□□ -0.14
HDAC6-220ENST00000477528 SMIM14Q96QK8 99 aa14.18□□□□□ -0.14
HDAC6-220ENST00000477528 ANKRD60Q9BZ19 345 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms