RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GNPTGQ9UJJ9 305 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 R3HDM2Q9Y2K5 976 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 MEMO1Q9Y316 297 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 MRFAP1Q9Y605 127 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 A0A0U1RQJ8 604 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 PRMT5O14744 637 aaPredicted RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 FANCGO15287 622 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 GPC4O75487 556 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 NDUFS3O75489 264 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF189O75820 626 aaPredicted RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 C1orf105O95561 183 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 TSPAN12O95859 305 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 SYF2O95926 243 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 CD46P15529 392 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 CAPN3P20807 821 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 AOAHP28039 575 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 AVPR1BP47901 424 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 ART1P52961 327 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 HADHBP55084 474 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 GDF10P55107 478 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 RWDD2BP57060 319 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 FASTKQ14296 549 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 OR1C1Q15619 314 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 AARS2Q5JTZ9 985 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 TSTD2Q5T7W7 516 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 THEMIS2Q5TEJ8 643 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 KCTD11Q693B1 232 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 SPINK14Q6IE38 97 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 LRRC8BQ6P9F7 803 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 SPPL2CQ8IUH8 684 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 VSTM4Q8IW00 320 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 ZC3H7AQ8IWR0 971 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 TMEM178AQ8NBL3 297 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 PPFIBP2Q8ND30 876 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 OR13J1Q8NGT2 312 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 MAGEC3Q8TD91 643 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 AGAP11Q8TF27 550 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 MRFAP1L1Q96HT8 127 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF354BQ96LW1 612 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 GPR137Q96N19 417 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF285Q96NJ3 590 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 SIGLEC12Q96PQ1 595 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 CARD6Q9BX69 1037 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 RBCK1Q9BYM8 510 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 RNF32Q9H0A6 362 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF700Q9H0M5 742 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 UTP6Q9NYH9 597 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 HCN3Q9P1Z3 774 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 TAC3Q9UHF0 121 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 PCYOX1Q9UHG3 505 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 METRNQ9UJH8 293 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 PCDHA3Q9Y5H8 950 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 PCDHA13Q9Y5I0 950 aa6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 INTS1Q8N201 2190 aaKnown RBP6.33□□□□□ -1.4
RTFDC1-206ENST00000477485 IGLV3-12A0A075B6K2 115 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 FAM90A27PA6NNH2 459 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 E5RI56 91 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PRRG2O14669 202 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 KPNA5O15131 536 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CD3EAPO15446 510 aaKnown RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CDC40O60508 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CDC123O75794 336 aaPredicted RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 WISP2O76076 250 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 SLCO2B1O94956 709 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CCNDBP1O95273 360 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 IPO7O95373 1038 aaKnown RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 IFNB1P01574 187 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 TPOP07202 933 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PKMP14618 531 aaKnown RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 ZNF24P17028 368 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 AGAP20933 346 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 FMO4P31512 558 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PTPN7P35236 360 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CYLC1P35663 651 aaPredicted RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 SLC26A3P40879 764 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CCNFP41002 786 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 TTPAP49638 278 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 SESN2P58004 480 aaPredicted RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CSNK1G2P78368 415 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 ACTN3Q08043 901 aaPredicted RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 TUBA3CQ13748 450 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MAPKAPK3Q16644 382 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 NDUFA9Q16795 377 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MEP1AQ16819 746 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 KRTCAP3Q53RY4 240 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 ACER2Q5QJU3 275 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 MEI1Q5TIA1 1274 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 TUBA3EQ6PEY2 450 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CEP128Q6ZU80 1094 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 GALNTL5Q7Z4T8 443 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CPEB2Q7Z5Q1 589 aaKnown RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 CRLF3Q8IUI8 442 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 PLD3Q8IV08 490 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 EID3Q8N140 333 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 GHDCQ8N2G8 530 aa6.32□□□□□ -1.4
RTFDC1-206ENST00000477485 AMER3Q8N944 861 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms