RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SERTAD3Q9UJW9 196 aa11.9□□□□□ -0.5
APTX-220ENST00000476858 PADI1Q9ULC6 663 aa11.9□□□□□ -0.5
APTX-220ENST00000476858 OARD1Q9Y530 152 aa11.9□□□□□ -0.5
APTX-220ENST00000476858 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 TARM1B6A8C7 271 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 TK2O00142 265 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 MASP2O00187 686 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 SHBGP04278 402 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 C2P06681 752 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 BCL6P41182 706 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 GLRBP48167 497 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 AGTR2P50052 363 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 PMS2P54278 862 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 SLC12A2P55011 1212 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 VSNL1P62760 191 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 NAB1Q13506 487 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 DNASE1L3Q13609 305 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 LINC00303Q3SY05 128 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 LRRC8EQ6NSJ5 796 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 C16orf46Q6P387 395 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 COX15Q7KZN9 410 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 GPR155Q7Z3F1 870 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 ADCK2Q7Z695 626 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 RAB42Q8N4Z0 105 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 OR8K5Q8NH50 307 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 STARD8Q92502 1023 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 EXTL1Q92935 676 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 ZUFSPQ96AP4 578 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 RHBDF1Q96CC6 855 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 MOCOSQ96EN8 888 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 SELENOSQ9BQE4 189 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 DHRS4Q9BTZ2 278 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 SEMA4CQ9C0C4 833 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 ACTL8Q9H568 366 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 ALG9Q9H6U8 611 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 FANCEQ9HB96 536 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 SYTL2Q9HCH5 934 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 IRAK4Q9NWZ3 460 aa11.89□□□□□ -0.51
APTX-220ENST00000476858 NOVA2Q9UNW9 492 aaKnown RBP11.89□□□□□ -0.51
APTX-220ENST00000476858 PCM1Q15154 2024 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 UBXN8O00124 270 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 B3GALT4O96024 378 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 PRB1P04280 392 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 EPORP19235 508 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 TFEBP19484 476 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 VARSP26640 1264 aaKnown RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 PHBP35232 272 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 HSD17B2P37059 387 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 MAGEA12P43365 314 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 OR1D4P47884 311 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 SLC6A12P48065 614 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 DSG2Q14126 1118 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 ERV3-1Q14264 604 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 SLC29A2Q14542 456 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 TGFBIQ15582 683 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 SOWAHCQ53LP3 525 aaPredicted RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 ADNP2Q6IQ32 1131 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 RHBDD2Q6NTF9 364 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 TTLL10Q6ZVT0 673 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 RAPH1Q70E73 1250 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 PRSS41Q7RTY9 318 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 ISCA2Q86U28 154 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 THOC6Q86W42 341 aaKnown RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 BPHLQ86WA6 291 aaPredicted RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 ENDOVQ8N8Q3 282 aaKnown RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 EXD3Q8N9H8 876 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 N4BP2L2Q92802 583 aaPredicted RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 NEIL2Q969S2 332 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 TSPAN17Q96FV3 270 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 SLC45A3Q96JT2 553 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 ATOH8Q96SQ7 321 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 RUVBL1Q9Y265 456 aaKnown RBP11.88□□□□□ -0.51
APTX-220ENST00000476858 SLC22A14Q9Y267 594 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 HEATR5BQ9P2D3 2071 aa11.88□□□□□ -0.51
APTX-220ENST00000476858 A0A087WUV0 522 aaPredicted RBP11.87□□□□□ -0.51
APTX-220ENST00000476858 A0A096LPK6 155 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 FITM1A5D6W6 292 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 TRIM49D1C9J1S8 452 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 DNAJB6O75190 326 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 ENO2P09104 434 aaPredicted RBP11.87□□□□□ -0.51
APTX-220ENST00000476858 HIST1H2AGP0C0S8 130 aaPredicted RBP11.87□□□□□ -0.51
APTX-220ENST00000476858 MTHFD2P13995 350 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 HIST1H2ADP20671 130 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 HSPA7P48741 367 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 EFNA3P52797 238 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 UCNP55089 124 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 AP1S2P56377 157 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 CDC20Q12834 499 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 LY6DQ14210 128 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 TBR1Q16650 682 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 LCTLQ6UWM7 567 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 SHISA6Q6ZSJ9 500 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 GPSM1Q86YR5 675 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 GPR135Q8IZ08 494 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 KIAA1191Q96A73 305 aa11.87□□□□□ -0.51
APTX-220ENST00000476858 KCTD12Q96CX2 325 aaKnown RBP11.87□□□□□ -0.51
APTX-220ENST00000476858 HIST1H2AHQ96KK5 128 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms