RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TCTE1Q5JU00 501 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 PROSER1Q86XN7 944 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 KDF1Q8NAX2 398 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-208ENST00000476342 ABHD11Q8NFV4 315 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 ESAMQ96AP7 390 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 GPRC5BQ9NZH0 403 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 PCDHB3Q9Y5E6 796 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 TPRP12270 2363 aaKnown RBP28.33■■■□□ 2.12
HOXB3-208ENST00000476342 MDC1Q14676 2089 aaKnown RBP28.32■■■□□ 2.12
HOXB3-208ENST00000476342 CCNT2O60583 730 aaKnown RBP28.32■■■□□ 2.12
HOXB3-208ENST00000476342 CPNE3O75131 537 aaKnown RBP28.32■■■□□ 2.12
HOXB3-208ENST00000476342 TIAF1O95411 115 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 GNAZP19086 355 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 CCT5P48643 541 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 ZNF844Q08AG5 666 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 SETDB1Q15047 1291 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 FBXO42Q6P3S6 717 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 TLDC1Q6P9B6 456 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 CROCCP2Q86T23 111 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 ZFAND4Q86XD8 727 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 IQCKQ8N0W5 287 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 SLC7A5P2Q9GIP4 190 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 AP1M2Q9Y6Q5 423 aa28.32■■■□□ 2.12
HOXB3-208ENST00000476342 FOXO6A8MYZ6 492 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 HAT1O14929 419 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 ZSCAN9O15535 394 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-208ENST00000476342 KRT4P19013 534 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 RPS15AP62244 130 aaKnown RBP28.31■■■□□ 2.12
HOXB3-208ENST00000476342 CSNK1G2P78368 415 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 SH2D5Q6ZV89 423 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 TMPRSS11BQ86T26 416 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 ZIM3Q96PE6 472 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 PELI2Q9HAT8 420 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 TMEM216Q9P0N5 145 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 OPTCQ9UBM4 332 aa28.31■■■□□ 2.12
HOXB3-208ENST00000476342 TNPO3Q9Y5L0 923 aaKnown RBP28.31■■■□□ 2.12
HOXB3-208ENST00000476342 H3BMH7 237 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 DLGAP3O95886 979 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 ZNF28P17035 718 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 PDK4Q16654 411 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 TRABD2AQ86V40 505 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 TBC1D19Q8N5T2 526 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 SNX31Q8N9S9 440 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 KCNE4Q8WWG9 221 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 RERGQ96A58 199 aaPredicted RBP28.3■■■□□ 2.12
HOXB3-208ENST00000476342 SPRY4Q9C004 299 aa28.3■■■□□ 2.12
HOXB3-208ENST00000476342 ARGLU1Q9NWB6 273 aaPredicted RBP28.3■■■□□ 2.12
HOXB3-208ENST00000476342 K7EPI3 171 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 COPEO14579 308 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 HBQ1P09105 142 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 TAC1P20366 129 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 AGTR2P50052 363 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 VSX2P58304 361 aaPredicted RBP28.29■■■□□ 2.12
HOXB3-208ENST00000476342 MAP7Q14244 749 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 CATSPEREQ5SY80 951 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 FRMPD2BQ6IN97 320 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 METTL2BQ6P1Q9 378 aaKnown RBP28.29■■■□□ 2.12
HOXB3-208ENST00000476342 LRIG3Q6UXM1 1119 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 NLGN4XQ8N0W4 816 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 PTGR2Q8N8N7 351 aaPredicted RBP28.29■■■□□ 2.12
HOXB3-208ENST00000476342 NLGN4YQ8NFZ3 816 aaPredicted RBP28.29■■■□□ 2.12
HOXB3-208ENST00000476342 OR4K1Q8NGD4 311 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 ZNF285Q96NJ3 590 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 SPRTNQ9H040 489 aaPredicted RBP28.29■■■□□ 2.12
HOXB3-208ENST00000476342 ACTR5Q9H9F9 607 aaPredicted RBP28.29■■■□□ 2.12
HOXB3-208ENST00000476342 SRPK3Q9UPE1 567 aa28.29■■■□□ 2.12
HOXB3-208ENST00000476342 CLGNO14967 610 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 RRP8O43159 456 aaKnown RBP28.28■■■□□ 2.12
HOXB3-208ENST00000476342 NTRK1P04629 796 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 CRHR1P34998 444 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 CEP85LQ5SZL2 805 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 C16orf46Q6P387 395 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 NXPE4Q6UWF7 544 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 DTX1Q86Y01 620 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 PLD3Q8IV08 490 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 C4orf33Q8N1A6 199 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 TTC29Q8NA56 475 aaPredicted RBP28.28■■■□□ 2.12
HOXB3-208ENST00000476342 CLIP3Q96DZ5 547 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 PHF21BQ96EK2 531 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 THAP11Q96EK4 314 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 CNTNAP3BQ96NU0 1288 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 OR2A5Q96R48 311 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 CNTNAP3Q9BZ76 1288 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 ENAMQ9NRM1 1142 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 GRID1Q9ULK0 1009 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 ASB1Q9Y576 335 aa28.28■■■□□ 2.12
HOXB3-208ENST00000476342 STX16-NPEPL1H3BU86 382 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 STX16O14662 325 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 RGS16O15492 202 aaPredicted RBP28.27■■■□□ 2.12
HOXB3-208ENST00000476342 ZNF749O43361 778 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 RAD1O60671 282 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 ATP1A2P50993 1020 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 SLC18A2Q05940 514 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 GRM7Q14831 915 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 PCBP2Q15366 365 aaKnown RBP eCLIP28.27■■■□□ 2.12
HOXB3-208ENST00000476342 PRAMEF17Q5VTA0 474 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 C6orf15Q6UXA7 325 aaPredicted RBP28.27■■■□□ 2.12
HOXB3-208ENST00000476342 SRRM1Q8IYB3 904 aaKnown RBP28.27■■■□□ 2.12
HOXB3-208ENST00000476342 TMEM151AQ8N4L1 468 aa28.27■■■□□ 2.12
HOXB3-208ENST00000476342 ESX1Q8N693 406 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms