RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	GPAA1	O43292	621 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TBX1	O43435	398 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	POP7	O75817	140 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CTDNEP1	O95476	244 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TDP2	O95551	362 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	MLYCD	O95822	493 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TOP3B	O95985	862 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BCL10	O95999	233 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PROC	P04070	461 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	IGKV5-2	P06315	115 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	C2	P06681	752 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ITGAV	P06756	1048 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ADH1A	P07327	375 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CHRNG	P07510	517 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	OR2T7	P0C7T2	308 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	STAG3L2	P0CL84	134 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	RRAS	P10301	218 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	NCF1	P14598	390 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TAT	P17735	454 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CTPS1	P17812	591 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BMP6	P22004	513 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	GLDC	P23378	1020 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ATP5A1	P25705	553 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	MPI	P34949	423 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BUD31	P41223	144 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PRKCI	P41743	596 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PIK3CB	P42338	1070 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PTGIR	P43119	386 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	RPS5	P46782	204 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CAPZB	P47756	277 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	SERPINB10	P48595	397 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TGM4	P49221	684 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CDC34	P49427	236 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	MAPK10	P53779	464 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	EPHB3	P54753	998 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ITGA1	P56199	1179 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	NRG3	P56975	720 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	DEFA1	P59665	94 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	DEFA3	P59666	94 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	RAP1B	P61224	184 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PSME3	P61289	254 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	MAGOH	P61326	146 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	YPEL5	P62699	121 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BLOC1S1	P78537	153 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	SLC7A9	P82251	487 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PMP22	Q01453	160 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	NHLH2	Q02577	135 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CNTN1	Q12860	1018 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	NPRL3	Q12980	569 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	STRN3	Q13033	797 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	MAPK7	Q13164	816 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	IL18R1	Q13478	541 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TRA2A	Q13595	282 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	SLC12A1	Q13621	1099 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	COL9A3	Q14050	684 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	COL9A2	Q14055	689 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	VEZF1	Q14119	521 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ZNF267	Q14586	743 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TRIP10	Q15642	601 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TBCC	Q15814	346 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	GRK1	Q15835	563 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BAK1	Q16611	211 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	KNOP1	Q1ED39	458 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	SLC9C1	Q4G0N8	1177 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BCL7A	Q4VC05	210 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	RNASE10	Q5GAN6	216 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CLLU1	Q5K131	121 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	RABGAP1L	Q5R372	815 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	OGFRL1	Q5TC84	451 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	YOD1	Q5VVQ6	348 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	WSCD1	Q658N2	575 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ETFRF1	Q6IPR1	90 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	C11orf63	Q6NUN7	778 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	LRFN4	Q6PJG9	635 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ZC3H14	Q6PJT7	736 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	POTEA	Q6S8J7	498 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	AFTPH	Q6ULP2	937 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	METTL7B	Q6UX53	244 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	LRRN1	Q6UXK5	716 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	WASH2P	Q6VEQ5	465 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	SLC39A5	Q6ZMH5	540 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	BBS12	Q6ZW61	710 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	NDUFAF7	Q7L592	441 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CXXC5	Q7LFL8	322 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	SLC16A14	Q7RTX9	510 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ZNF551	Q7Z340	670 aa	Predicted RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	ZNF438	Q7Z4V0	828 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	LHFPL4	Q7Z7J7	247 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	CNTN4	Q8IWV2	1026 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	UNC5B	Q8IZJ1	945 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TCTE3	Q8IZS6	198 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	RDH10	Q8IZV5	341 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	PARP8	Q8N3A8	854 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	OR2C3	Q8N628	320 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	COMMD1	Q8N668	190 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	MB21D1	Q8N884	522 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	TXNDC5	Q8NBS9	432 aa	Known RBP	3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	DNAAF1	Q8NEP3	725 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	DMBX1	Q8NFW5	382 aa		3.75	□□□□□ -1.81
LSM2-211	ENST00000475835	OR5D18	Q8NGL1	313 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms