RNA–Protein interactions for RNA: ENST00000475480.5

TMEM41A-206, Transcript of transmembrane protein 41A, human

TSL 3

Gene TMEM41A, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM41A-206	ENST00000475480	ARHGAP11A	Q6P4F7	1023 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	POGLUT1	Q8NBL1	392 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	OR5M9	Q8NGP3	310 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ZNF398	Q8TD17	642 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TADA1	Q96BN2	335 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SRPK1	Q96SB4	655 aa	Known RBP	12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	YIPF2	Q9BWQ6	316 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	C14orf105	Q9NVL8	296 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TRPC4	Q9UBN4	977 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ADGRE2	Q9UHX3	823 aa		12.82	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CR1	P17927	2039 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	GOLGA6L9	A6NEM1	432 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CD48	P09326	243 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	EPX	P11678	715 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	GZMA	P12544	262 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TNNT1	P13805	278 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	PTPRCAP	Q14761	206 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TCEAL1	Q15170	157 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	BOLA3	Q53S33	107 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CATSPERE	Q5SY80	951 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CCDC122	Q5T0U0	273 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	FRMPD2B	Q6IN97	320 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LGI4	Q8N135	537 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SLC35F6	Q8N357	371 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LRRC57	Q8N9N7	239 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LMNTD1	Q8N9Z9	388 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	OR52N2	Q8NGI0	321 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	C16orf52	Q8NHV5	167 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SLCO2A1	Q92959	643 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	C10orf90	Q96M02	699 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SH3GL2	Q99962	352 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CEP41	Q9BYV8	373 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	INTU	Q9ULD6	942 aa		12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TDRKH	Q9Y2W6	561 aa	Known RBP	12.81	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ABCA1	O95477	2261 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480		A0A0A6YYK5	440 aa	Predicted RBP	12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	GRID2IP	A4D2P6	1211 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CLCA1	A8K7I4	914 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	NPIPA2	E9PIF3	369 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	NPIPA3	F8WFD2	350 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CTSV	O60911	334 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TMEM253	P0C7T8	217 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	C8orf89	P0DMQ9	161 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	PCK1	P35558	622 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	MESD	Q14696	234 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	POU4F3	Q15319	338 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	FIGLA	Q6QHK4	219 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SYT10	Q6XYQ8	523 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	B3GNT6	Q6ZMB0	384 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LANCL3	Q6ZV70	420 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	KIAA1328	Q86T90	577 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	HIPK1	Q86Z02	1210 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	AMER3	Q8N944	861 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SPATA22	Q8NHS9	363 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	PIP5K1A	Q99755	562 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TGIF2	Q9GZN2	237 aa		12.8	□□□□□ -0.36
TMEM41A-206	ENST00000475480	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	1e-9	■■■■□ 20.4
TMEM41A-206	ENST00000475480	DSCAM	O60469	2012 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CNOT4	O95628	575 aa	Known RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	HRG	P04196	525 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CYP1A2	P05177	515 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CCDC172	P0C7W6	258 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	NID1	P14543	1247 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	MX2	P20592	715 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	HADHB	P55084	474 aa	Known RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	IFI35	P80217	286 aa	Predicted RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SLC10A2	Q12908	348 aa	Predicted RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SPA17	Q15506	151 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SYT16	Q17RD7	645 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CCDC70	Q6NSX1	233 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ZNF585A	Q6P3V2	769 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CPNE8	Q86YQ8	564 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ZC3H7A	Q8IWR0	971 aa	Known RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SULF2	Q8IWU5	870 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LINC01555	Q8NAE3	123 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	RELL2	Q8NC24	303 aa	Predicted RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	CCNY	Q8ND76	341 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	RNASE6	Q93091	150 aa	Known RBP	12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	PLCD4	Q9BRC7	762 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	ATG10	Q9H0Y0	220 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	DEFB127	Q9H1M4	99 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TRABD	Q9H4I3	376 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	GUCA1B	Q9UMX6	200 aa		12.79	□□□□□ -0.36
TMEM41A-206	ENST00000475480	EML6	Q6ZMW3	1958 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LOC105369274	A0A096LPK9	316 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	LOC102723532	A0A0G2JNH3	316 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	TMCO5B	A8MYB1	307 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SPRY1	O43609	319 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SRPX2	O60687	465 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	FTL	P02792	175 aa	Predicted RBP	12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	H2AFZ	P0C0S5	128 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	SLC26A3	P40879	764 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	GBE1	Q04446	702 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	DMTN	Q08495	405 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	RPA4	Q13156	261 aa		12.78	□□□□□ -0.36
TMEM41A-206	ENST00000475480	MUM1	Q2TAK8	710 aa		12.78	□□□□□ -0.36

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