RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TRIM55Q9BYV6 548 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 GPAMQ9HCL2 828 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 ACSS2Q9NR19 701 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 TLK1Q9UKI8 766 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 MTO1Q9Y2Z2 717 aaKnown RBP22.94■■□□□ 1.26
CPNE1-223ENST00000475146 MAU2Q9Y6X3 613 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 ANKRD12Q6UB98 2062 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 HEATR5BQ9P2D3 2071 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CTAGE15A4D2H0 777 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CNOT3O75175 753 aaKnown RBP22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CTAGE8P0CG41 777 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 HRH2P25021 359 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 STX2P32856 288 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 OR1D4P47884 311 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 POU4F1Q01851 419 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 PRTGQ2VWP7 1150 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 LACTB2Q53H82 288 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-223ENST00000475146 SBSNQ6UWP8 590 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CYS1Q717R9 158 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 PRICKLE2Q7Z3G6 844 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CTAGE6Q86UF2 777 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CTAGE4Q8IX94 777 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 MMGT1Q8N4V1 131 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 PPM1NQ8N819 430 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 ATL1Q8WXF7 558 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 TSPAN17Q96FV3 270 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 C10orf90Q96M02 699 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 OR2A5Q96R48 311 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 RBBP8Q99708 897 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 SGPP1Q9BX95 441 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 ING2Q9H160 280 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 SYNPO2LQ9H987 977 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CAB39LQ9H9S4 337 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 POPDC3Q9HBV1 291 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 LRRC4CQ9HCJ2 640 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 TMEM184CQ9NVA4 438 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 SH2B3Q9UQQ2 575 aa22.93■■□□□ 1.26
CPNE1-223ENST00000475146 CDC7O00311 574 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 MED26O95402 600 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 RELAQ04206 551 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 ATP1A4Q13733 1029 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 USP10Q14694 798 aaKnown RBP22.92■■□□□ 1.26
CPNE1-223ENST00000475146 SSPNQ14714 243 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 HKDC1Q2TB90 917 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 KBTBD12Q3ZCT8 623 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 LCTLQ6UWM7 567 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 COX15Q7KZN9 410 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 OVCH1Q7RTY7 1134 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 PTRH1Q86Y79 214 aaKnown RBP22.92■■□□□ 1.26
CPNE1-223ENST00000475146 NOA1Q8NC60 698 aaKnown RBP22.92■■□□□ 1.26
CPNE1-223ENST00000475146 FBF1Q8TES7 1133 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 ANKRD49Q8WVL7 239 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 COL26A1Q96A83 441 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 PYCR2Q96C36 320 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 FBXL8Q96CD0 374 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 HAUS8Q9BT25 410 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 ZDHHC18Q9NUE0 388 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 NOVA2Q9UNW9 492 aaKnown RBP22.92■■□□□ 1.26
CPNE1-223ENST00000475146 RUVBL1Q9Y265 456 aaKnown RBP22.92■■□□□ 1.26
CPNE1-223ENST00000475146 TP53TG5Q9Y2B4 290 aa22.92■■□□□ 1.26
CPNE1-223ENST00000475146 SMG1Q96Q15 3661 aaKnown RBP22.92■■□□□ 1.26
CPNE1-223ENST00000475146 SLC28A2O43868 658 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 CDH1P12830 882 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 CCL11P51671 97 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 PRMT9Q6P2P2 845 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 FRA10AC1Q70Z53 315 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 MRGPREQ86SM8 312 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 OR56A3Q8NH54 315 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 KIF18AQ8NI77 898 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 ANKRD7Q92527 254 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 PTERQ96BW5 349 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 GPR22Q99680 433 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 ZNF304Q9HCX3 659 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 CTNNAL1Q9UBT7 734 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 CTSFQ9UBX1 484 aa22.91■■□□□ 1.26
CPNE1-223ENST00000475146 TXNDC9O14530 226 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 PHGDHO43175 533 aaKnown RBP22.9■■□□□ 1.26
CPNE1-223ENST00000475146 ONECUT2O95948 504 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 C1QAP02745 245 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 ALBP02768 609 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 STATHP02808 62 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 PLA2G2AP14555 144 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 NR1D1P20393 614 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 EMP3P54852 163 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 RPS15AP62244 130 aaKnown RBP22.9■■□□□ 1.26
CPNE1-223ENST00000475146 CSNK1G2P78368 415 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 PPP1R3AQ16821 1122 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 IP6K3Q96PC2 410 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 EGFL8Q99944 293 aa22.9■■□□□ 1.26
CPNE1-223ENST00000475146 UNKQ9C0B0 810 aaKnown RBP22.9■■□□□ 1.26
CPNE1-223ENST00000475146 MTRF1LQ9UGC7 380 aaKnown RBP22.9■■□□□ 1.26
CPNE1-223ENST00000475146 NXT1Q9UKK6 140 aaKnown RBP22.9■■□□□ 1.26
CPNE1-223ENST00000475146 PEX12O00623 359 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 P2RX6O15547 441 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 UMODP07911 640 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 STMN1P16949 149 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 FBLP22087 321 aaKnown RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 SPRP35270 261 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-223ENST00000475146 RRADP55042 308 aa22.89■■□□□ 1.25
CPNE1-223ENST00000475146 EFTUD2Q15029 972 aaKnown RBP eCLIP22.89■■□□□ 1.253e-17■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms