RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CCDC151A5D8V7 595 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 SRRM3A6NNA2 597 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 E7EQ34 232 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 H7BY64 318 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 CTIFO43310 598 aaKnown RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 RAD1O60671 282 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 CPNE3O75131 537 aaKnown RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 SCRG1O75711 98 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 OR2B3O76000 313 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 KIAA0754O94854 1291 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 HBQ1P09105 142 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 EPORP19235 508 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 ABHD18Q0P651 414 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 SETDB1Q15047 1291 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 THEMIS2Q5TEJ8 643 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 FRMPD2BQ6IN97 320 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 SPACA3Q8IXA5 215 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 NLGN4XQ8N0W4 816 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 ESX1Q8N693 406 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 NLGN4YQ8NFZ3 816 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 SNRNP27Q8WVK2 155 aaKnown RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 HNRNPLLQ8WVV9 542 aaKnown RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 KCNE4Q8WWG9 221 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 TM4SF19Q96DZ7 209 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 PRAP1Q96NZ9 151 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 EGFL8Q99944 293 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 MRPL57Q9BQC6 102 aaKnown RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 CAPS2Q9BXY5 557 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 ULBP3Q9BZM4 244 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 CD244Q9BZW8 370 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 SPRTNQ9H040 489 aaPredicted RBP16.21■□□□□ 0.19
SCAF11-206ENST00000474828 PELI2Q9HAT8 420 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 TMCO1Q9UM00 188 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 KCNE2Q9Y6J6 123 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 ITPR1Q14643 2758 aa16.21■□□□□ 0.19
SCAF11-206ENST00000474828 LOC105369274A0A096LPK9 316 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 LOC102723532A0A0G2JNH3 316 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 UBXN8O00124 270 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 ZSCAN9O15535 394 aaPredicted RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 RRP8O43159 456 aaKnown RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 STK16O75716 305 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 STAT5AP42229 794 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 CASP2P42575 452 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 GDF5P43026 501 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 ALDH18A1P54886 795 aaKnown RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 RPS15AP62244 130 aaKnown RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 TLE3Q04726 772 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 SLC18A2Q05940 514 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 PCBP2Q15366 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 DEFB110Q30KQ9 67 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 C18orf21Q32NC0 220 aaPredicted RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 C6orf15Q6UXA7 325 aaPredicted RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 SLCO4C1Q6ZQN7 724 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 LRRC70Q7Z2Q7 622 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 GPR135Q8IZ08 494 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 DSELQ8IZU8 1212 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 OR4N4Q8N0Y3 316 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 OR2W6PQ8NHA6 318 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 EPS8L3Q8TE67 593 aaKnown RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 SLC5A11Q8WWX8 675 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 DPH2Q9BQC3 489 aaPredicted RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 C1QTNF3Q9BXJ4 246 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 MRPL46Q9H2W6 279 aaKnown RBP16.2■□□□□ 0.18
SCAF11-206ENST00000474828 PCMTD2Q9NV79 361 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 CD274Q9NZQ7 290 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 SRPK3Q9UPE1 567 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 ASB1Q9Y576 335 aa16.2■□□□□ 0.18
SCAF11-206ENST00000474828 HEATR5BQ9P2D3 2071 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 A0A1W2PPM1 405 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 TRBC2A0A5B9 178 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 STX16-NPEPL1H3BU86 382 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 STX16O14662 325 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 HAT1O14929 419 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 ZNF749O43361 778 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PRAMEF4O60810 478 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 CDH1P12830 882 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 GNAZP19086 355 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 GLRBP48167 497 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 CCR8P51685 355 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 NFKB2Q00653 900 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 CDC16Q13042 620 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 GPS2Q13227 327 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 TGIF1Q15583 401 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 TBCCQ15814 346 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PRAMEF17Q5VTA0 474 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PRAMEF9Q5VWM5 478 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 ATG9BQ674R7 924 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 NXPE4Q6UWF7 544 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 VN1R4Q7Z5H5 301 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 TMEM126BQ8IUX1 230 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PROKR1Q8TCW9 393 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 GBP5Q96PP8 586 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 SELENOSQ9BQE4 189 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 PITHD1Q9GZP4 211 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-206ENST00000474828 NT5DC2Q9H857 520 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 ACTR5Q9H9F9 607 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-206ENST00000474828 DNAJC11Q9NVH1 559 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 MKS1Q9NXB0 559 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 XPR1Q9UBH6 696 aa16.19■□□□□ 0.18
SCAF11-206ENST00000474828 TBK1Q9UHD2 729 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms