RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MATN4O95460 622 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 PSMB5P28074 263 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 STX2P32856 288 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 UQCRFS1P47985 274 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 CDKN2DP55273 166 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 OCA2Q04671 838 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 ELOAQ14241 798 aaKnown RBP14.47□□□□□ -0.09
VARS-223ENST00000474643 GBX1Q14549 363 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 INPP5JQ15735 1006 aaPredicted RBP14.47□□□□□ -0.09
VARS-223ENST00000474643 RBBP7Q16576 425 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 NEK10Q6ZWH5 1172 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 ZADH2Q8N4Q0 377 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 LRRN4CLQ8ND94 238 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 LINGO1Q96FE5 620 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 CABS1Q96KC9 395 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 SMAD5Q99717 465 aaKnown RBP14.47□□□□□ -0.09
VARS-223ENST00000474643 YIPF2Q9BWQ6 316 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 SPATA7Q9P0W8 599 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 FBXL4Q9UKA2 621 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 VWA7Q9Y334 891 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 PSAT1Q9Y617 370 aa14.47□□□□□ -0.09
VARS-223ENST00000474643 A0A0J9YVX5 310 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 TCRBV9S1A1TA0A576 114 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 BLACEA4D250 179 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 ARHGEF33A8MVX0 844 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 TARM1B6A8C7 271 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 SRPX2O60687 465 aaPredicted RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 PIAS1O75925 651 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 SORBS2O94875 1100 aaKnown RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 CCNDBP1O95273 360 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 ALBP02768 609 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 RHOXF2BP0C7M4 288 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 IL2P60568 153 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 AIMP2Q13155 320 aaKnown RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 GRB7Q14451 532 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 CCSMST1Q4G0I0 132 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 WASHC2DQ5SRD0 308 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 THEMIS2Q5TEJ8 643 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 FCRL6Q6DN72 434 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 MRPL14Q6P1L8 145 aaKnown RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 PAQR3Q6TCH7 311 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 SHISA6Q6ZSJ9 500 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 UBE2R2Q712K3 238 aaPredicted RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 OVCH1Q7RTY7 1134 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 PIWIL4Q7Z3Z4 852 aaKnown RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 ADCK2Q7Z695 626 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 PPM1NQ8N819 430 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 OR2L3Q8NG85 312 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 OR9A1PQ8NGU1 263 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 FBF1Q8TES7 1133 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 EEF1AKMT1Q8WVE0 214 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 RERGQ96A58 199 aaPredicted RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 VPS39Q96JC1 886 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 FMO2Q99518 471 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 RHOXF2Q9BQY4 288 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.09
VARS-223ENST00000474643 WDR54Q9H977 334 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 B3GNT3Q9Y2A9 372 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 MED16Q9Y2X0 877 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 MAP4K5Q9Y4K4 846 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 MAU2Q9Y6X3 613 aa14.46□□□□□ -0.09
VARS-223ENST00000474643 LRRK2Q5S007 2527 aa14.46□□□□□ -0.1
VARS-223ENST00000474643 FAM95CA0A1B0GW59 222 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 HYKKA2RU49 373 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 KRT87PA6NCN2 255 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 H3BMH7 237 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 EIF3FO00303 357 aaPredicted RBP14.45□□□□□ -0.1
VARS-223ENST00000474643 PRPF4O43172 522 aaKnown RBP eCLIP14.45□□□□□ -0.1
VARS-223ENST00000474643 PSIP1O75475 530 aaKnown RBP14.45□□□□□ -0.1
VARS-223ENST00000474643 GP1BBP13224 206 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 FBLP22087 321 aaKnown RBP14.45□□□□□ -0.1
VARS-223ENST00000474643 MMP11P24347 488 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 PHBP35232 272 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 OR1D4P47884 311 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 FOXL2P58012 376 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 GPX6P59796 221 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 ILF2Q12905 390 aaKnown RBP14.45□□□□□ -0.1
VARS-223ENST00000474643 TUBB8Q3ZCM7 444 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 CYS1Q717R9 158 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 PPP1R32Q7Z5V6 425 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 ZC3HC1Q86WB0 502 aaKnown RBP14.45□□□□□ -0.1
VARS-223ENST00000474643 SPNS2Q8IVW8 549 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 SMPDL3AQ92484 453 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 CPNE1Q99829 537 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 ZFYVE21Q9BQ24 234 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 CRB3Q9BUF7 120 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 MENTQ9BUN1 341 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 RHOJQ9H4E5 214 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 ANKZF1Q9H8Y5 726 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 ZNF304Q9HCX3 659 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 MRPS30Q9NP92 439 aaKnown RBP14.45□□□□□ -0.1
VARS-223ENST00000474643 SMYD2Q9NRG4 433 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 DOPEY2Q9Y3R5 2298 aa14.45□□□□□ -0.1
VARS-223ENST00000474643 FAM159BA6NKW6 160 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 CXorf49A8MYA2 514 aaPredicted RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 UMODP07911 640 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 ANXA5P08758 320 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 HIST1H2AGP0C0S8 130 aaPredicted RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 HIST1H2ADP20671 130 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 FDXRP22570 491 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms