RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SERHLQ9NQF3 203 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 FBXL12Q9NXK8 326 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 NEUROG3Q9Y4Z2 214 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 RFXANKO14593 260 aa21■□□□□ 0.95
CCM2-206ENST00000474617 RAP2AP10114 183 aa21■□□□□ 0.95
CCM2-206ENST00000474617 HOXB9P17482 250 aaPredicted RBP21■□□□□ 0.95
CCM2-206ENST00000474617 HRH2P25021 359 aa21■□□□□ 0.95
CCM2-206ENST00000474617 TIA1P31483 386 aaKnown RBP eCLIP21■□□□□ 0.95
CCM2-206ENST00000474617 TIE1P35590 1138 aa21■□□□□ 0.95
CCM2-206ENST00000474617 CHN2P52757 468 aa21■□□□□ 0.95
CCM2-206ENST00000474617 COL19A1Q14993 1142 aa21■□□□□ 0.95
CCM2-206ENST00000474617 IRF4Q15306 451 aa21■□□□□ 0.95
CCM2-206ENST00000474617 ERICH5Q6P6B1 374 aa21■□□□□ 0.95
CCM2-206ENST00000474617 ZBTB49Q6ZSB9 765 aa21■□□□□ 0.95
CCM2-206ENST00000474617 SERPINA11Q86U17 422 aa21■□□□□ 0.95
CCM2-206ENST00000474617 CALHM3Q86XJ0 350 aa21■□□□□ 0.95
CCM2-206ENST00000474617 ST13P4Q8IZP2 240 aaPredicted RBP21■□□□□ 0.95
CCM2-206ENST00000474617 MFSD2AQ8NA29 543 aa21■□□□□ 0.95
CCM2-206ENST00000474617 BIRC7Q96CA5 298 aa21■□□□□ 0.95
CCM2-206ENST00000474617 REXO5Q96IC2 774 aaKnown RBP21■□□□□ 0.95
CCM2-206ENST00000474617 MTERF1Q99551 399 aaKnown RBP21■□□□□ 0.95
CCM2-206ENST00000474617 CPPED1Q9BRF8 314 aaPredicted RBP21■□□□□ 0.95
CCM2-206ENST00000474617 RPF2Q9H7B2 306 aaKnown RBP21■□□□□ 0.95
CCM2-206ENST00000474617 NT5DC2Q9H857 520 aa21■□□□□ 0.95
CCM2-206ENST00000474617 ATAD3AQ9NVI7 634 aa21■□□□□ 0.95
CCM2-206ENST00000474617 AHSPQ9NZD4 102 aa21■□□□□ 0.95
CCM2-206ENST00000474617 BTNL2Q9UIR0 455 aa21■□□□□ 0.95
CCM2-206ENST00000474617 NCKAP1Q9Y2A7 1128 aa21■□□□□ 0.95
CCM2-206ENST00000474617 TMEM98Q9Y2Y6 226 aa21■□□□□ 0.95
CCM2-206ENST00000474617 AP4B1Q9Y6B7 739 aa21■□□□□ 0.95
CCM2-206ENST00000474617 PIPSLA2A3N6 862 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 MAGEB17A8MXT2 336 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 TIPRLO75663 272 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 LDLRP01130 860 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 ZCCHC18P0CG32 403 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 PCNAP12004 261 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 CTHP32929 405 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 GSTM5P46439 218 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 OR4D2P58180 307 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 SLBPQ14493 270 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCM2-206ENST00000474617 PGS1Q32NB8 556 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 C2orf27AQ580R0 203 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 FAM83HQ6ZRV2 1179 aaPredicted RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 IKBIPQ70UQ0 350 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 HORMAD1Q86X24 394 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 MICU2Q8IYU8 434 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 DTWD1Q8N5C7 304 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 DENND6BQ8NEG7 585 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 SMPDL3AQ92484 453 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 DNASE1L2Q92874 299 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 MTERF3Q96E29 417 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 MSLNLQ96KJ4 702 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 SLC17A9Q9BYT1 436 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 MAGIXQ9H6Y5 334 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 OLAHQ9NV23 265 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 GEMIN8Q9NWZ8 242 aaKnown RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 SLC25A37Q9NYZ2 338 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 SLC17A4Q9Y2C5 497 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 PCDHB14Q9Y5E9 798 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 TXNDC9O14530 226 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 SCAMP2O15127 329 aaKnown RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 DEAF1O75398 565 aaPredicted RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 ANXA4P09525 319 aaPredicted RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 COX7A2P14406 83 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 GLULP15104 373 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 TACR1P25103 407 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 PTX3P26022 381 aaPredicted RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 CCT8P50990 548 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 CHRNB3Q05901 458 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 THEMIS2Q5TEJ8 643 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 CAPRIN2Q6IMN6 1127 aaKnown RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 DOK6Q6PKX4 331 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 C17orf64Q86WR6 236 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 MSRB3Q8IXL7 192 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 EID3Q8N140 333 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 NATD1Q8N6N6 113 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 CLHC1Q8NHS4 586 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 GANCQ8TET4 914 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 FOXJ1Q92949 421 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 FAM120BQ96EK7 910 aaKnown RBP20.99■□□□□ 0.95
CCM2-206ENST00000474617 PHF12Q96QT6 1004 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 COQ10BQ9H8M1 238 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 DMRT3Q9NQL9 472 aa20.99■□□□□ 0.95
CCM2-206ENST00000474617 TRPM6Q9BX84 2022 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 CACNB4O00305 520 aaPredicted RBP20.98■□□□□ 0.95
CCM2-206ENST00000474617 SEMA3DO95025 777 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 WASP42768 502 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 ZNF763Q0D2J5 394 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 GRSF1Q12849 480 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCM2-206ENST00000474617 DDX39BQ13838 428 aaKnown RBP20.98■□□□□ 0.95
CCM2-206ENST00000474617 TMEM196Q5HYL7 178 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 HMBOX1Q6NT76 420 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 PGBD3Q8N328 593 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 OR10A6Q8NH74 314 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 COQ8BQ96D53 544 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 BHLHE41Q9C0J9 482 aaPredicted RBP20.98■□□□□ 0.95
CCM2-206ENST00000474617 FAM192AQ9GZU8 254 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 RHBGQ9H310 441 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 WASH6PQ9NQA3 447 aa20.98■□□□□ 0.95
CCM2-206ENST00000474617 GMPR2Q9P2T1 348 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms