RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 HDXQ7Z353 690 aa19.31■□□□□ 0.68
APP-215ENST00000474136 SNX20Q7Z614 316 aa19.31■□□□□ 0.68
APP-215ENST00000474136 ZNF295-AS1Q8N0V1 137 aa19.31■□□□□ 0.68
APP-215ENST00000474136 CLDN19Q8N6F1 224 aa19.31■□□□□ 0.68
APP-215ENST00000474136 GSDMBQ8TAX9 411 aa19.31■□□□□ 0.68
APP-215ENST00000474136 NR4A3Q92570 626 aa19.31■□□□□ 0.68
APP-215ENST00000474136 WDR54Q9H977 334 aa19.31■□□□□ 0.68
APP-215ENST00000474136 ZDHHC3Q9NYG2 299 aa19.31■□□□□ 0.68
APP-215ENST00000474136 PLA2G3Q9NZ20 509 aa19.31■□□□□ 0.68
APP-215ENST00000474136 NINJ2Q9NZG7 142 aa19.31■□□□□ 0.68
APP-215ENST00000474136 SUCOQ9UBS9 1254 aaKnown RBP19.31■□□□□ 0.68
APP-215ENST00000474136 ASF1AQ9Y294 204 aa19.31■□□□□ 0.68
APP-215ENST00000474136 TDRKHQ9Y2W6 561 aaKnown RBP19.31■□□□□ 0.68
APP-215ENST00000474136 FAM169AQ9Y6X4 670 aa19.31■□□□□ 0.68
APP-215ENST00000474136 MED13LQ71F56 2210 aa19.3■□□□□ 0.68
APP-215ENST00000474136 IGLV3-16A0A075B6K0 115 aa19.3■□□□□ 0.68
APP-215ENST00000474136 A0A087WUV0 522 aaPredicted RBP19.3■□□□□ 0.68
APP-215ENST00000474136 ISM1B1AKI9 464 aa19.3■□□□□ 0.68
APP-215ENST00000474136 CCL21O00585 134 aa19.3■□□□□ 0.68
APP-215ENST00000474136 STX2P32856 288 aa19.3■□□□□ 0.68
APP-215ENST00000474136 ZNF140P52738 457 aaPredicted RBP19.3■□□□□ 0.68
APP-215ENST00000474136 SLC5A12Q1EHB4 618 aa19.3■□□□□ 0.68
APP-215ENST00000474136 ANKRD20A4Q4UJ75 823 aa19.3■□□□□ 0.68
APP-215ENST00000474136 HP1BP3Q5SSJ5 553 aaPredicted RBP19.3■□□□□ 0.68
APP-215ENST00000474136 TSTD2Q5T7W7 516 aa19.3■□□□□ 0.68
APP-215ENST00000474136 MPP5Q8N3R9 675 aa19.3■□□□□ 0.68
APP-215ENST00000474136 ZNF808Q8N4W9 903 aaPredicted RBP19.3■□□□□ 0.68
APP-215ENST00000474136 DTWD1Q8N5C7 304 aa19.3■□□□□ 0.68
APP-215ENST00000474136 METTL27Q8N6F8 245 aaPredicted RBP19.3■□□□□ 0.68
APP-215ENST00000474136 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.3■□□□□ 0.68
APP-215ENST00000474136 HEXDCQ8WVB3 486 aa19.3■□□□□ 0.68
APP-215ENST00000474136 DLG3Q92796 817 aa19.3■□□□□ 0.68
APP-215ENST00000474136 LMF1Q96S06 567 aa19.3■□□□□ 0.68
APP-215ENST00000474136 VPS37BQ9H9H4 285 aa19.3■□□□□ 0.68
APP-215ENST00000474136 PPCSQ9HAB8 311 aa19.3■□□□□ 0.68
APP-215ENST00000474136 CHST11Q9NPF2 352 aa19.3■□□□□ 0.68
APP-215ENST00000474136 CHRAC1Q9NRG0 131 aa19.3■□□□□ 0.68
APP-215ENST00000474136 SH3BGRL2Q9UJC5 107 aa19.3■□□□□ 0.68
APP-215ENST00000474136 BANF1O75531 89 aa19.29■□□□□ 0.68
APP-215ENST00000474136 ONECUT2O95948 504 aa19.29■□□□□ 0.68
APP-215ENST00000474136 ALBP02768 609 aa19.29■□□□□ 0.68
APP-215ENST00000474136 MAGP20916 626 aa19.29■□□□□ 0.68
APP-215ENST00000474136 HSD17B3P37058 310 aa19.29■□□□□ 0.68
APP-215ENST00000474136 EIF3BP55884 814 aaKnown RBP19.29■□□□□ 0.68
APP-215ENST00000474136 ARG2P78540 354 aa19.29■□□□□ 0.68
APP-215ENST00000474136 CRADDP78560 199 aa19.29■□□□□ 0.68
APP-215ENST00000474136 NAPRTQ6XQN6 538 aa19.29■□□□□ 0.68
APP-215ENST00000474136 CROCCP2Q86T23 111 aa19.29■□□□□ 0.68
APP-215ENST00000474136 SERPINA9Q86WD7 417 aa19.29■□□□□ 0.68
APP-215ENST00000474136 MCATQ8IVS2 390 aaKnown RBP19.29■□□□□ 0.68
APP-215ENST00000474136 IGDCC3Q8IVU1 814 aa19.29■□□□□ 0.68
APP-215ENST00000474136 AGGF1Q8N302 714 aaeCLIP19.29■□□□□ 0.68
APP-215ENST00000474136 LMNTD1Q8N9Z9 388 aa19.29■□□□□ 0.68
APP-215ENST00000474136 CFAP36Q96G28 342 aa19.29■□□□□ 0.68
APP-215ENST00000474136 FUT8Q9BYC5 575 aa19.29■□□□□ 0.68
APP-215ENST00000474136 SLC26A1Q9H2B4 701 aa19.29■□□□□ 0.68
APP-215ENST00000474136 OR6C2Q9NZP2 312 aa19.29■□□□□ 0.68
APP-215ENST00000474136 UNC5CO95185 931 aa19.28■□□□□ 0.68
APP-215ENST00000474136 ACSL3O95573 720 aa19.28■□□□□ 0.68
APP-215ENST00000474136 PSMA3P25788 255 aa19.28■□□□□ 0.68
APP-215ENST00000474136 ACADLP28330 430 aa19.28■□□□□ 0.68
APP-215ENST00000474136 MC4RP32245 332 aa19.28■□□□□ 0.68
APP-215ENST00000474136 OR1D4P47884 311 aa19.28■□□□□ 0.68
APP-215ENST00000474136 ARSFP54793 590 aa19.28■□□□□ 0.68
APP-215ENST00000474136 KRTAP10-9P60411 292 aa19.28■□□□□ 0.68
APP-215ENST00000474136 SLC29A2Q14542 456 aa19.28■□□□□ 0.68
APP-215ENST00000474136 CRYMQ14894 314 aa19.28■□□□□ 0.68
APP-215ENST00000474136 VWA2Q5GFL6 755 aa19.28■□□□□ 0.68
APP-215ENST00000474136 CDKL2Q92772 493 aa19.28■□□□□ 0.68
APP-215ENST00000474136 VIPAS39Q9H9C1 493 aa19.28■□□□□ 0.68
APP-215ENST00000474136 ZNF160Q9HCG1 818 aa19.28■□□□□ 0.68
APP-215ENST00000474136 CUTCQ9NTM9 273 aa19.28■□□□□ 0.68
APP-215ENST00000474136 NLE1Q9NVX2 485 aaPredicted RBP19.28■□□□□ 0.68
APP-215ENST00000474136 PRSS21Q9Y6M0 314 aa19.28■□□□□ 0.68
APP-215ENST00000474136 DSCR3O14972 297 aa19.27■□□□□ 0.68
APP-215ENST00000474136 ATP8B1O43520 1251 aa19.27■□□□□ 0.68
APP-215ENST00000474136 F10P00742 488 aa19.27■□□□□ 0.68
APP-215ENST00000474136 NUDT17P0C025 328 aa19.27■□□□□ 0.68
APP-215ENST00000474136 PIM1P11309 404 aaPredicted RBP19.27■□□□□ 0.68
APP-215ENST00000474136 ACRV1P26436 265 aa19.27■□□□□ 0.68
APP-215ENST00000474136 MST1P26927 711 aa19.27■□□□□ 0.68
APP-215ENST00000474136 SSTR1P30872 391 aa19.27■□□□□ 0.68
APP-215ENST00000474136 GRIA3P42263 894 aa19.27■□□□□ 0.68
APP-215ENST00000474136 ACVR1Q04771 509 aa19.27■□□□□ 0.68
APP-215ENST00000474136 CASP8Q14790 479 aa19.27■□□□□ 0.68
APP-215ENST00000474136 TESK1Q15569 626 aa19.27■□□□□ 0.68
APP-215ENST00000474136 LONRF1Q17RB8 773 aa19.27■□□□□ 0.68
APP-215ENST00000474136 KIAA0930Q6ICG6 404 aaPredicted RBP19.27■□□□□ 0.68
APP-215ENST00000474136 TMEM207Q6UWW9 146 aa19.27■□□□□ 0.68
APP-215ENST00000474136 LMNTD2Q8IXW0 634 aa19.27■□□□□ 0.68
APP-215ENST00000474136 TBC1D21Q8IYX1 336 aa19.27■□□□□ 0.68
APP-215ENST00000474136 ZNF669Q96BR6 464 aaPredicted RBP19.27■□□□□ 0.68
APP-215ENST00000474136 C8orf44Q96CB5 159 aa19.27■□□□□ 0.68
APP-215ENST00000474136 DNAJC1Q96KC8 554 aaKnown RBP19.27■□□□□ 0.68
APP-215ENST00000474136 CYTH2Q99418 400 aa19.27■□□□□ 0.68
APP-215ENST00000474136 WDR83Q9BRX9 315 aaKnown RBP19.27■□□□□ 0.68
APP-215ENST00000474136 ACBD3Q9H3P7 528 aa19.27■□□□□ 0.68
APP-215ENST00000474136 SEMA3GQ9NS98 782 aa19.27■□□□□ 0.68
APP-215ENST00000474136 TREX1Q9NSU2 369 aa19.27■□□□□ 0.68
APP-215ENST00000474136 PTGFRNQ9P2B2 879 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms