RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ATP6V0A2Q9Y487 856 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TNRC18O15417 2968 aaPredicted RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 OBSL1O75147 1896 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 GBF1Q92538 1859 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TANC1Q9C0D5 1861 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 MICAL3Q7RTP6 2002 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 NUP205Q92621 2012 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DOCK6Q96HP0 2047 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SPENQ96T58 3664 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CNTNAP1P78357 1384 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DOCK4Q8N1I0 1966 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ALPK3Q96L96 1907 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 FRYLO94915 3013 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 GPR75-ASB3A0A0A6YYF3 556 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 A0A1B0GVL5 298 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC69A6NI79 296 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 LRRC53A6NM62 1247 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PP2D1A8MPX8 630 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SRRM5B3KS81 715 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 NPHP1O15259 732 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 ECE2O60344 883 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 WISP2O76076 250 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 IPO7O95373 1038 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 BMP10O95393 424 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 DEXIO95424 95 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 YEATS4O95619 227 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CLDN1O95832 211 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 AGR2O95994 175 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 MMP1P03956 469 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 HNRNPA1P09651 372 aaKnown RBP eCLIP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 GOLGA8HP0CJ92 632 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PDHBP11177 359 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PCP11498 1178 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 FOLR2P14207 255 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 AKR1B1P15121 316 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PFKFB1P16118 471 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 KLK2P20151 261 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 IL4RP24394 825 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 U2AF2P26368 475 aaKnown RBP eCLIP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CASP1P29466 404 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 MARCKSP29966 332 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CDAP32320 146 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PSMC2P35998 433 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CCT5P48643 541 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM50BP56557 158 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 UBE3AQ05086 875 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC173Q0VFZ6 552 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CDC16Q13042 620 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 TRDNQ13061 729 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CALCOCO2Q13137 446 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 MFAP5Q13361 173 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CAMK1Q14012 370 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 LY6DQ14210 128 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 STK38Q15208 465 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 TAF13Q15543 124 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SLC15A2Q16348 729 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 IL17AQ16552 155 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CAMK4Q16566 473 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 DPCR1Q3MIW9 517 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SPECC1Q5M775 1068 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 RESP18Q5W5W9 173 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 APOBEC3HQ6NTF7 200 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CDC42EP5Q6NZY7 148 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 Q75L30 129 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 TSPAN33Q86UF1 283 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 LUZP1Q86V48 1076 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PLA2G4DQ86XP0 818 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 GPALPP1Q8IXQ4 340 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SMAP1Q8IYB5 467 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 C17orf53Q8N3J3 647 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SUMF1Q8NBK3 374 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 OR5AP2Q8NGF4 316 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 OR14L1PQ8NHC6 308 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF519Q8TB69 540 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 ZCCHC10Q8TBK6 192 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PIBF1Q8WXW3 757 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 MRPS27Q92552 414 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 DYRK2Q92630 601 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 ESR2Q92731 530 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 IGSF8Q969P0 613 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 HVCN1Q96D96 273 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SLC45A3Q96JT2 553 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PPP1R13BQ96KQ4 1090 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PRICKLE1Q96MT3 831 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SEMA3CQ99985 751 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 MGME1Q9BQP7 344 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CRNKL1Q9BZJ0 848 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 GPR63Q9BZJ6 419 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 NACAP1Q9BZK3 213 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 KRT23Q9C075 422 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SLITRK2Q9H156 845 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 RNF41Q9H4P4 317 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 ZSCAN16Q9H4T2 348 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 LTB4R2Q9NPC1 389 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 SLC6A13Q9NSD5 602 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 DDX19AQ9NUU7 478 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 TEX10Q9NXF1 929 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 OR14J1Q9UGF5 321 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 MAD2L2Q9UI95 211 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms