RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CYP4F8P98187 520 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 RGS21Q2M5E4 152 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 VMACQ2NL98 169 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 TTLL9Q3SXZ7 439 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 DEPDC1Q5TB30 811 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 RETSATQ6NUM9 610 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 CCDC81Q6ZN84 652 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SERPINA11Q86U17 422 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 FAM217AQ8IXS0 508 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 CBARPQ8N350 705 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 APH1BQ8WW43 257 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 CMTM7Q96FZ5 175 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF641Q96N77 438 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PANX1Q96RD7 426 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF300Q96RE9 604 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 LYSMD1Q96S90 227 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 MTERF1Q99551 399 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 COPS8Q99627 209 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ATP13A3Q9H7F0 1226 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 RASSF1Q9NS23 344 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PDP1Q9P0J1 537 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 NDRG4Q9ULP0 352 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 CHD7Q9P2D1 2997 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 EIF3FO00303 357 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PCDHGA12O60330 932 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ETHE1O95571 254 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 OLFM2O95897 454 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 C1SP09871 688 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 LAMP1P11279 417 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PRPS2P11908 318 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SRCP12931 536 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 KRT20P35900 424 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ARPC4P59998 168 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 MVKQ03426 396 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 CLCA4Q14CN2 919 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PLEKHG6Q3KR16 790 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PERM1Q5SV97 790 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF648Q5T619 568 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 C6orf183Q5T699 404 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 FRG2Q64ET8 278 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 GAREM2Q75VX8 874 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 LRRC70Q7Z2Q7 622 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 TSEN54Q7Z6J9 526 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 MFSD4AQ8N468 514 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 OR2AP1Q8NGE2 309 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 STARD8Q92502 1023 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 MAL2Q969L2 176 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ECHDC3Q96DC8 303 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SCRN2Q96FV2 425 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 HSH2DQ96JZ2 352 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 FRG2BQ96QU4 278 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 MRPL9Q9BYD2 267 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 RMND5AQ9H871 391 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 FAM8A1Q9UBU6 413 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SAMD4AQ9UPU9 718 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 B3GNT3Q9Y2A9 372 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF451Q9Y4E5 1061 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 DNAH14Q0VDD8 3507 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 PCM1Q15154 2024 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CLDN25C9JDP6 229 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 GFYI3L273 518 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 FPGTO14772 594 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SGTAO43765 313 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 LCKP06239 509 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 BMP4P12644 408 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 GJA1P17302 382 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 GPX2P18283 190 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CDH3P22223 829 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 KDELR2P33947 212 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CCL23P55773 120 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CREMQ03060 361 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CHIT1Q13231 466 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 TOP3AQ13472 1001 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 IL18R1Q13478 541 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 OXA1LQ15070 435 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CATSPEREQ5SY80 951 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 LYPLAL1Q5VWZ2 237 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 PDE12Q6L8Q7 609 aaKnown RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF621Q6ZSS3 439 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 TPRG1Q6ZUI0 275 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 FKBP9P1Q75LS8 142 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 TTC29Q8NA56 475 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SCAMP4Q969E2 229 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 TBC1D20Q96BZ9 403 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 C11orf24Q96F05 449 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SIGLEC11Q96RL6 698 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SMG9Q9H0W8 520 aaKnown RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 ABCB8Q9NUT2 735 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SCHIP1Q9P0W5 487 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SNX6Q9UNH7 406 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 PRRG1O14668 218 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 GCM2O75603 506 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-214ENST00000473778 CBSLP0DN79 551 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 SERPINA4P29622 427 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 AQP1P29972 269 aa10.59□□□□□ -0.71
C9orf3-214ENST00000473778 HLA-FP30511 346 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms