RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SFMBT2Q5VUG0 894 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 ZDHHC20Q5W0Z9 365 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 TMEM198Q66K66 360 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 VITQ6UXI7 678 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 PPP1R21Q6ZMI0 780 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 QSOX2Q6ZRP7 698 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 ZBTB49Q6ZSB9 765 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 DENND5BQ6ZUT9 1274 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 ERN2Q76MJ5 926 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 DET1Q7L5Y6 550 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 LINGO2Q7L985 606 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 HAUS6Q7Z4H7 955 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 MFSD6LQ8IWD5 586 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 WDR63Q8IWG1 891 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 SLC35F3Q8IY50 421 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 NAGSQ8N159 534 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 GUF1Q8N442 669 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 TC2NQ8N9U0 490 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 MIGA1Q8NAN2 632 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 SPC24Q8NBT2 197 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 PPP4R1Q8TF05 950 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 RLN3Q8WXF3 142 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 FAM162AQ96A26 154 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 TMEM18Q96B42 140 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 CENPTQ96BT3 561 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 NXNL1Q96CM4 212 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 SGF29Q96ES7 293 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 STAMBPL1Q96FJ0 436 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 DYNLL2Q96FJ2 89 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 SLC41A2Q96JW4 573 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 CNOT6LQ96LI5 555 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 FER1L6-AS2Q96M78 137 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 CFAP57Q96MR6 1250 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 CCNL2Q96S94 520 aaPredicted RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 SMC6Q96SB8 1091 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 TIMP4Q99727 224 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 FAM110AQ9BQ89 295 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 WACQ9BTA9 647 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 NPFFR1Q9GZQ6 430 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 PIGMQ9H3S5 423 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 RAD21L1Q9H4I0 556 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 TASP1Q9H6P5 420 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 PIH1D3Q9NQM4 214 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 DECR2Q9NUI1 292 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 DDX43Q9NXZ2 648 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 TUBE1Q9UJT0 475 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 BTBD3Q9Y2F9 522 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 RPH3AQ9Y2J0 694 aaPredicted RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 SRPRBQ9Y5M8 271 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 MYO18AQ92614 2054 aaKnown RBP2.28□□□□□ -2.04
CALD1-216ENST00000473714 CROCCQ5TZA2 2017 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 TGP01266 2768 aa2.28□□□□□ -2.04
CALD1-216ENST00000473714 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.28□□□□□ -2.054e-6■■□□□ 13.3
CALD1-216ENST00000473714 LOC102723996A0A087X1L8 192 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 TRBV5-7A0A0A0MS05 114 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 KIR2DS5A0A0G2JLQ3 304 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 A0A0U1RQK1 487 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 ZNF320A2RRD8 509 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 DENND3A2RUS2 1198 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 PRR23D1E9PI22 279 aaPredicted RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 H0YAE9 185 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 KIR2DS3K7RE56 304 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 CHADO15335 359 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 CCL16O15467 120 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 AP5Z1O43299 807 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 PRAMEF11O60813 436 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 CRCPO75575 148 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 EGFP01133 1207 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 LGALS2P05162 132 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 THEGLP0DJG4 465 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 PRR23D2P0DMB1 279 aaPredicted RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 HLA-DPA1P20036 260 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 UBA1P22314 1058 aaKnown RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 STX2P32856 288 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 PTGER4P35408 488 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 HNF4AP41235 474 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 RFX5P48382 616 aaPredicted RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 NPY4RP50391 375 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 CRYBB1P53674 252 aaPredicted RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 CDH13P55290 713 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 MRPS6P82932 125 aaKnown RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 ID2Q02363 134 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 ZNF33AQ06730 810 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 FOXM1Q08050 763 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 HSPB3Q12988 150 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 PLA2G7Q13093 441 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 MAD2L1Q13257 205 aaPredicted RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 RCN2Q14257 317 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 NFE2L1Q14494 772 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 E2F5Q15329 346 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 MEP1AQ16819 746 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 MMEL1Q495T6 779 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 CBWD6Q4V339 395 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 MIDNQ504T8 468 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 FAM98BQ52LJ0 330 aaKnown RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 PDLIM3Q53GG5 364 aaPredicted RBP2.27□□□□□ -2.05
CALD1-216ENST00000473714 SGO1Q5FBB7 561 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 NHSL2Q5HYW2 709 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 CBWD3Q5JTY5 395 aa2.27□□□□□ -2.05
CALD1-216ENST00000473714 FCRLBQ6BAA4 426 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms