RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 HMGXB4Q9UGU5 601 aa12.93□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 J3QLW9 94 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 VILLO15195 856 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PCDH7O60245 1069 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HEXBP07686 556 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF19P17023 458 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FMO3P31513 532 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MPPED2Q15777 294 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 EIPR1Q53HC9 387 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TMEM225Q6GV28 225 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 C12orf45Q8N5I9 185 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GATSQ8NAP1 163 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ACOT12Q8WYK0 555 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FZD3Q9NPG1 666 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FAM234BA2RU67 622 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CYP11A1P05108 521 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF41P51814 821 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 REP15Q6BDI9 236 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 UBQLNLQ8IYU4 475 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CEP76Q8TAP6 659 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SERTAD3Q9UJW9 196 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR51F1A6NGY5 319 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MEN1O00255 615 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PLK4O00444 970 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MMP20O60882 483 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RAB4BP61018 213 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CA9Q16790 459 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FAM43BQ6ZT52 329 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 JPH3Q8WXH2 748 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CALML5Q9NZT1 146 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 A0A1B0GVC2 190 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ADAMDEC1O15204 470 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CTHP32929 405 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 POLR2J2Q9GZM3 115 aaKnown RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR10A4Q9H209 315 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SPATA6Q9NWH7 488 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SORCS3Q9UPU3 1222 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LILRA4P59901 499 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ARL9Q6T311 187 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC51AQ86UW1 340 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GOLM1Q8NBJ4 401 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR8S1Q8NH09 359 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 DUSP11O75319 330 aaKnown RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PDYNP01213 254 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.92□□□□□ -0.345e-6■■□□□ 14
NPHP3-ACAD11-201ENST00000471702 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PQLC1Q8N2U9 271 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OR8K3Q8NH51 312 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TXN2Q99757 166 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GNG8Q9UK08 70 aa12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AP2A1O95782 977 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RHOQP17081 205 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CLRN1P58418 232 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC26A5P58743 744 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FUKQ8N0W3 1084 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AURKAO14965 403 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 MAGEA11P43364 429 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CARD16Q5EG05 197 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GDPD4Q6W3E5 623 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 Q6ZVU0 165 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 KCTD9Q7L273 389 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PHF13Q86YI8 300 aaPredicted RBP12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PXYLP1Q8TE99 480 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 ANKRD27Q96NW4 1050 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BARD1Q99728 777 aaKnown RBP12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 EBF3Q9H4W6 596 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SNCGO76070 127 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 CD53P19397 219 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 GALK2Q01415 458 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 RBM48Q5RL73 367 aaKnown RBP12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 TATDN1Q6P1N9 297 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BBS12Q6ZW61 710 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SLC26A9Q7LBE3 791 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BCO2Q9BYV7 579 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 EURLQ9NYK6 297 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 AIPO00170 330 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BRINP1O60477 761 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 OPN1SWP03999 348 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 FHP07954 510 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 HLA-EP13747 358 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 BLMHQ13867 455 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 SNX29P2Q8IUI4 249 aa12.91□□□□□ -0.34
NPHP3-ACAD11-201ENST00000471702 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms