RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ABRAXAS1Q6UWZ7 409 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 LAS2Q8IYD9 372 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 LRRC58Q96CX6 371 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 RAB11FIP5Q9BXF6 653 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 PCBD2Q9H0N5 130 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 CUEDC1Q9NWM3 386 aaPredicted RBP17.48■□□□□ 0.39
SMC4-211ENST00000469858 INVSQ9Y283 1065 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 SLCO1B1Q9Y6L6 691 aa17.48■□□□□ 0.39
SMC4-211ENST00000469858 ARHGEF17Q96PE2 2063 aaPredicted RBP17.47■□□□□ 0.39
SMC4-211ENST00000469858 HEATR5BQ9P2D3 2071 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 DYTNA2CJ06 578 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 FXYD1O00168 92 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 PSMG1O95456 288 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 LMNAP02545 664 aaKnown RBP17.47■□□□□ 0.39
SMC4-211ENST00000469858 THEGLP0DJG4 465 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 XRCC1P18887 633 aaPredicted RBP17.47■□□□□ 0.39
SMC4-211ENST00000469858 ME2P23368 584 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 TACR1P25103 407 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 ACSM2AQ08AH3 577 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 FAM174BQ3ZCQ3 159 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 ACSM2BQ68CK6 577 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 SLC2A7Q6PXP3 512 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 DEFB119Q8N690 84 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 FAM156AQ8NDB6 213 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 HIPK4Q8NE63 616 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
SMC4-211ENST00000469858 DCLRE1BQ9H816 532 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 ICKQ9UPZ9 632 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 L3MBTL1Q9Y468 752 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 COLEC10Q9Y6Z7 277 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 PLXND1Q9Y4D7 1925 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 CROCCQ5TZA2 2017 aa17.47■□□□□ 0.39
SMC4-211ENST00000469858 TRIM38O00635 465 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 NDUFS2O75306 463 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 RCN1Q15293 331 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 SF1Q15637 639 aaKnown RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 WASH2PQ6VEQ5 465 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 GLB1L3Q8NCI6 653 aaPredicted RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 PJA1Q8NG27 643 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 OR2L8Q8NGY9 312 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 JPH3Q8WXH2 748 aaPredicted RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 SLC6A18Q96N87 628 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 HOPXQ9BPY8 73 aaPredicted RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 GPATCH1Q9BRR8 931 aaKnown RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 CHRDQ9H2X0 955 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 CLMPQ9H6B4 373 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 WASH6PQ9NQA3 447 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 DMRT3Q9NQL9 472 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 AASDHPPTQ9NRN7 309 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 TRNAU1APQ9NX07 287 aaKnown RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 TMEM181Q9P2C4 612 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 TDRD6O60522 2096 aaKnown RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 TRBV23OR9-2A0A075B6M9 112 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 TNFP01375 233 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 ACPPP15309 386 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 NUDT1P36639 197 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 CLDN8P56748 225 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 ILF3Q12906 894 aaKnown RBP eCLIP17.46■□□□□ 0.398e-14■■■■■ 40.3
SMC4-211ENST00000469858 CCNIQ14094 377 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 ZNF542PQ5EBM4 170 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 SPANXN4Q5MJ08 99 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 C10orf62Q5T681 223 aaPredicted RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 PRMT9Q6P2P2 845 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 TMIGD1Q6UXZ0 262 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 LPCAT2Q7L5N7 544 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 FAM129CQ86XR2 697 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 FAM9CQ8IZT9 166 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 KRT78Q8N1N4 520 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 SPEM1Q8N4L4 309 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 MINDY1Q8N5J2 469 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 C1orf52Q8N6N3 182 aaKnown RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 GPR156Q8NFN8 814 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 UBE2E3Q969T4 207 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 FCRL1Q96LA6 429 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 PELI2Q9HAT8 420 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 SLAMF8Q9P0V8 285 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 RUVBL1Q9Y265 456 aaKnown RBP17.46■□□□□ 0.39
SMC4-211ENST00000469858 DGKBQ9Y6T7 804 aa17.46■□□□□ 0.39
SMC4-211ENST00000469858 PRORSD1PA6NEY8 169 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 SNRNP200O75643 2136 aaKnown RBP17.45■□□□□ 0.38
SMC4-211ENST00000469858 LRATO95237 230 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 RBBP5Q15291 538 aaKnown RBP17.45■□□□□ 0.38
SMC4-211ENST00000469858 ICE2Q659A1 982 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 NRROSQ86YC3 692 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 ENDOVQ8N8Q3 282 aaKnown RBP17.45■□□□□ 0.38
SMC4-211ENST00000469858 SLC13A3Q8WWT9 602 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 EGLN2Q96KS0 407 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 ORAI3Q9BRQ5 295 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 TCEAL2Q9H3H9 227 aaPredicted RBP17.45■□□□□ 0.38
SMC4-211ENST00000469858 ZNF624Q9P2J8 865 aaPredicted RBP17.45■□□□□ 0.38
SMC4-211ENST00000469858 PCOLCE2Q9UKZ9 415 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 GON4LQ3T8J9 2241 aa17.45■□□□□ 0.38
SMC4-211ENST00000469858 COL6A3P12111 3177 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 SPTY2D1-AS1A0A0U1RR47 76 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 H7BY64 318 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 FOXE1O00358 373 aaPredicted RBP17.44■□□□□ 0.38
SMC4-211ENST00000469858 KDM1AO60341 852 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 MYO1DO94832 1006 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 TGFB1P01137 390 aa17.44■□□□□ 0.38
SMC4-211ENST00000469858 CCR8P51685 355 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms