RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 LIFP15018 202 aa17.03■□□□□ 0.32
MRPL28-208ENST00000469744 ADSLP30566 484 aaPredicted RBP17.03■□□□□ 0.32
MRPL28-208ENST00000469744 CSHL1Q14406 222 aa17.03■□□□□ 0.32
MRPL28-208ENST00000469744 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
MRPL28-208ENST00000469744 RINLQ6ZS11 566 aa17.03■□□□□ 0.32
MRPL28-208ENST00000469744 TIPARPQ7Z3E1 657 aaKnown RBP17.03■□□□□ 0.32
MRPL28-208ENST00000469744 ZDHHC12Q96GR4 267 aa17.03■□□□□ 0.32
MRPL28-208ENST00000469744 TEFMQ96QE5 360 aaKnown RBP17.03■□□□□ 0.32
MRPL28-208ENST00000469744 OR6C1Q96RD1 312 aa17.03■□□□□ 0.32
MRPL28-208ENST00000469744 TRMOQ9BU70 441 aa17.03■□□□□ 0.32
MRPL28-208ENST00000469744 IGHV5-51A0A0C4DH38 117 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 B2RBV5 119 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 STK17BO94768 372 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 ENO1P06733 434 aaKnown RBP17.02■□□□□ 0.32
MRPL28-208ENST00000469744 PREPP48147 710 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 RAP1GDS1P52306 607 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 CDKN2DP55273 166 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 NFKB2Q00653 900 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 ZNF549Q6P9A3 640 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 PRSS42Q7Z5A4 293 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 EXTL1Q92935 676 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 NRTNQ99748 197 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 SPRY4Q9C004 299 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 SYTL2Q9HCH5 934 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 EPHA6Q9UF33 1036 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 PRSS21Q9Y6M0 314 aa17.02■□□□□ 0.32
MRPL28-208ENST00000469744 COL6A6A6NMZ7 2263 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 KLHL33A6NCF5 533 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 OR6C74A6NCV1 312 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 IPO13O94829 963 aaKnown RBP17.01■□□□□ 0.31
MRPL28-208ENST00000469744 ZNF28P17035 718 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 TFEBP19484 476 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 PDHA2P29803 388 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 KRT33BQ14525 404 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 KCNAB1Q14722 419 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 ZNF658BQ4V348 819 aaPredicted RBP17.01■□□□□ 0.31
MRPL28-208ENST00000469744 CAPRIN2Q6IMN6 1127 aaKnown RBP17.01■□□□□ 0.31
MRPL28-208ENST00000469744 CERS6Q6ZMG9 384 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 NLGN4XQ8N0W4 816 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 AFAP1L2Q8N4X5 818 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 ZSCAN1Q8NBB4 408 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 LSM14AQ8ND56 463 aaKnown RBP17.01■□□□□ 0.31
MRPL28-208ENST00000469744 NLGN4YQ8NFZ3 816 aaPredicted RBP17.01■□□□□ 0.31
MRPL28-208ENST00000469744 RHEBL1Q8TAI7 183 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 MCUR1Q96AQ8 359 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 CMTM5Q96DZ9 223 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 MAP3K3Q99759 626 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 CCM2Q9BSQ5 444 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 ULBP3Q9BZM4 244 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 KIR3DX1Q9H7L2 352 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 EML4Q9HC35 981 aaKnown RBP17.01■□□□□ 0.31
MRPL28-208ENST00000469744 MRGBPQ9NV56 204 aa17.01■□□□□ 0.31
MRPL28-208ENST00000469744 OR5K3A6NET4 321 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 TOX3O15405 576 aaPredicted RBP17■□□□□ 0.31
MRPL28-208ENST00000469744 CHRNGP07510 517 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 PGGT1BP53609 377 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 NAA20P61599 178 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 SEMA3AQ14563 771 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 AARS2Q5JTZ9 985 aaKnown RBP17■□□□□ 0.31
MRPL28-208ENST00000469744 KLHL35Q6PF15 583 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 ACAD11Q709F0 780 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 LDB1Q86U70 411 aaPredicted RBP17■□□□□ 0.31
MRPL28-208ENST00000469744 ZNF843Q8N446 348 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 CPSF7Q8N684 471 aaKnown RBP17■□□□□ 0.31
MRPL28-208ENST00000469744 PHC3Q8NDX5 983 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 KLHL6Q8WZ60 621 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 LPGAT1Q92604 370 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 L3HYPDHQ96EM0 354 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 PPM1MQ96MI6 270 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 ZPBPQ9BS86 351 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 RAB33BQ9H082 229 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 OR52A5Q9H2C5 316 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 TFB2MQ9H5Q4 396 aaKnown RBP17■□□□□ 0.31
MRPL28-208ENST00000469744 TCF7L2Q9NQB0 619 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 HRASLS2Q9NWW9 162 aa17■□□□□ 0.31
MRPL28-208ENST00000469744 HELZ2Q9BYK8 2649 aaKnown RBP17■□□□□ 0.31
MRPL28-208ENST00000469744 LOC101059948A0A1B0GTJ6 334 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TRPC5OSA6NMA1 111 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 A8MT66 165 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 A8MUI8 341 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 OR1I1O60431 355 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 SMIM24O75264 130 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 NDUFS3O75489 264 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 NELFEP18615 380 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 IMPDH1P20839 514 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TTPAP49638 278 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 ADARP55265 1226 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TIAL1Q01085 375 aaKnown RBP eCLIP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 C19orf57Q0VDD7 668 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 UBAP2LQ14157 1087 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 LINC00303Q3SY05 128 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 SLC9B1Q4ZJI4 515 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 SH2D4BQ5SQS7 431 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TMEM207Q6UWW9 146 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 ISCA2Q86U28 154 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 OOSP2Q86WS3 158 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 RASGRP3Q8IV61 690 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 OR4E2Q8NGC2 313 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms