RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SNX13Q9Y5W8 968 aa9.84□□□□□ -0.83
MSH5-213ENST00000468136 ZFC3H1O60293 1989 aaKnown RBP9.83□□□□□ -0.84
MSH5-213ENST00000468136 TCRBV3S1A0A5B6 114 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 PIPSLA2A3N6 862 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 OR5K4A6NMS3 321 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 H0YJX3 145 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 SLC31A1O15431 190 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 PRAMEF4O60810 478 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 BAG2O95816 211 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 ACP5P13686 325 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 GABRG2P18507 467 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 SDC1P18827 310 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CD22P20273 847 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 IL10P22301 178 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 IL12AP29459 219 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 SHMT2P34897 504 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 GRK3P35626 688 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 KIR3DL1P43629 444 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 HSPA13P48723 471 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 SLBPQ14493 270 aaKnown RBP eCLIP9.83□□□□□ -0.84
MSH5-213ENST00000468136 PLA2G4EQ3MJ16 856 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CCSMST1Q4G0I0 132 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 LRIF1Q5T3J3 769 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 PRAMEF9Q5VWM5 478 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 TMIGD1Q6UXZ0 262 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 DLEU7Q6UYE1 221 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CHST15Q7LFX5 561 aaPredicted RBP9.83□□□□□ -0.84
MSH5-213ENST00000468136 SPATA24Q86W54 205 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 FAM129CQ86XR2 697 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 SYT12Q8IV01 421 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 RIMKLAQ8IXN7 391 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 BHLHE22Q8NFJ8 381 aaPredicted RBP9.83□□□□□ -0.84
MSH5-213ENST00000468136 ADCY4Q8NFM4 1077 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 OR4K1Q8NGD4 311 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 OR5AR1Q8NGP9 310 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 DNAJC9Q8WXX5 260 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 GTF2H4Q92759 462 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 TEX37Q96LM6 180 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 APOLD1Q96LR9 279 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 C12orf66Q96MD2 445 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CCDC115Q96NT0 180 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 OR52E6Q96RD3 313 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 FERD3LQ96RJ6 166 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 KCTD14Q9BQ13 255 aaPredicted RBP9.83□□□□□ -0.84
MSH5-213ENST00000468136 IER2Q9BTL4 223 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CHRDQ9H2X0 955 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 YY1AP1Q9H869 796 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 DMRT3Q9NQL9 472 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 ARMC1Q9NVT9 282 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 GEMIN8Q9NWZ8 242 aaKnown RBP9.83□□□□□ -0.84
MSH5-213ENST00000468136 OR6C2Q9NZP2 312 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 WNT16Q9UBV4 365 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 ADAM29Q9UKF5 820 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CNOT11Q9UKZ1 510 aaKnown RBP9.83□□□□□ -0.84
MSH5-213ENST00000468136 SUFUQ9UMX1 484 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 GPSM3Q9Y4H4 160 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 PCDHB3Q9Y5E6 796 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 GMEB1Q9Y692 573 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 DGKBQ9Y6T7 804 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 CHD9Q3L8U1 2897 aa9.83□□□□□ -0.84
MSH5-213ENST00000468136 FAM221BA6H8Z2 402 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 ANKDD1BA6NHY2 528 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 PDZK1P1A8MUH7 402 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 NME4O00746 187 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 HNRNPRO43390 633 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 CHRNB1P11230 501 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 MTHFD1P11586 935 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 PCNAP12004 261 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 PKLRP30613 574 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 TIA1P31483 386 aaKnown RBP eCLIP9.82□□□□□ -0.84
MSH5-213ENST00000468136 BLKP51451 505 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 CLCN2P51788 898 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 NEK2P51955 445 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 TRA2BP62995 288 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 REEP5Q00765 189 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 MS4A2Q01362 244 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 PRDX1Q06830 199 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 ZNF763Q0D2J5 394 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 FAM174BQ3ZCQ3 159 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 PAGE3Q5JUK9 113 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 KIAA0895LQ68EN5 471 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 NANOGP8Q6NSW7 305 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 LAYNQ6UX15 382 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 TMEM92Q6UXU6 159 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 ABI3BPQ7Z7G0 1075 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 RBM12BQ8IXT5 1001 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 METTL4Q8N3J2 472 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 TMEM145Q8NBT3 493 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 SRFBP1Q8NEF9 429 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 NELL1Q92832 810 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 VPS33AQ96AX1 596 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 MTFMTQ96DP5 389 aaKnown RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 APIPQ96GX9 242 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 ZNF764Q96H86 408 aaPredicted RBP9.82□□□□□ -0.84
MSH5-213ENST00000468136 TMEM74Q96NL1 305 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 CAMK1GQ96NX5 476 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 GBP5Q96PP8 586 aa9.82□□□□□ -0.84
MSH5-213ENST00000468136 HBEGFQ99075 208 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms