RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 MUC20Q8N307 709 aaPredicted RBP3.85□□□□□ -1.79
SMC4-208ENST00000467468 URGCPQ8TCY9 931 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 SLC26A7Q8TE54 656 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 SECTM1Q8WVN6 248 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 DNASE2BQ8WZ79 361 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 PYCR2Q96C36 320 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 LINGO1Q96FE5 620 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 CDKN2AIPNLQ96HQ2 116 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 EPSTI1Q96J88 318 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 GDAP1L1Q96MZ0 367 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 RASL10BQ96S79 203 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 CDK19Q9BWU1 502 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 S1PR5Q9H228 398 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 GAREM1Q9H706 876 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 PDRG1Q9NUG6 133 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 DAPK2Q9UIK4 370 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 TRMT6Q9UJA5 497 aaKnown RBP3.85□□□□□ -1.79
SMC4-208ENST00000467468 RPH3AQ9Y2J0 694 aaPredicted RBP3.85□□□□□ -1.79
SMC4-208ENST00000467468 KLK4Q9Y5K2 254 aa3.85□□□□□ -1.79
SMC4-208ENST00000467468 TRBV2A0A0J9YWF9 115 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 TMEM150CB9EJG8 249 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 PRSS46E5RG02 174 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 H0YIG0 161 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 ARPC2O15144 300 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 TXNL1O43396 289 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 F7P08709 466 aaPredicted RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 DESP17661 470 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 HPDP32754 393 aaPredicted RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 VAMP7P51809 220 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 AKAP17AQ02040 695 aaKnown RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 CACNG1Q06432 222 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 KLC1Q07866 573 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 RASGEF1BQ0VAM2 473 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 HYAL1Q12794 435 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 TRA2AQ13595 282 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMC4-208ENST00000467468 PDK1Q15118 436 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 STXBP2Q15833 593 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 RBBP7Q16576 425 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 PHKG1Q16816 387 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 ODF4Q2M2E3 257 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 PHLDA2Q53GA4 152 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 ASPRV1Q53RT3 343 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 LYSMD4Q5XG99 296 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 ZNF770Q6IQ21 691 aaPredicted RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 TOM1L2Q6ZVM7 507 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 MIER3Q7Z3K6 550 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 PIWIL4Q7Z3Z4 852 aaKnown RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 GPR141Q7Z602 305 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 SFR1Q86XK3 245 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 SERPINA12Q8IW75 414 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 NAGSQ8N159 534 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 KIAA0895Q8NCT3 520 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 ANKRD20A12PQ8NF67 263 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 OR11H4Q8NGC9 324 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 OR10Q1Q8NGQ4 319 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 PIGBQ92521 554 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 PANK2Q9BZ23 570 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 MIS12Q9H081 205 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 TSPYL1Q9H0U9 437 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 ACTL8Q9H568 366 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 TCF7L2Q9NQB0 619 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 GPR173Q9NS66 373 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 INTS10Q9NVR2 710 aaKnown RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 PKD2L2Q9NZM6 624 aa3.84□□□□□ -1.79
SMC4-208ENST00000467468 NOCTQ9UK39 431 aaKnown RBP3.84□□□□□ -1.79
SMC4-208ENST00000467468 IGHV4OR15-8A0A075B7B6 117 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 O00370 1275 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 IGKV3-20P01619 116 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 STAG3L1P0CL83 205 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 CDH1P12830 882 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 AHCYP23526 432 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 GLIPR1P48060 266 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 GPC3P51654 580 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 ATXN3P54252 364 aaPredicted RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 RPL24P83731 157 aaKnown RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 GFPT1Q06210 699 aaPredicted RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 IL10RBQ08334 325 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 NONOQ15233 471 aaKnown RBP eCLIP3.83□□□□□ -1.82e-8■■■■■ 98.1
SMC4-208ENST00000467468 ZRSR1Q15695 479 aaKnown RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 MAPK11Q15759 364 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 ITPRIPL2Q3MIP1 535 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 OR4A47Q6IF82 309 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 TMEM139Q8IV31 216 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 POC1AQ8NBT0 407 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 CLEC1AQ8NC01 280 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 NOA1Q8NC60 698 aaKnown RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 CNNM3Q8NE01 707 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 LNX1Q8TBB1 728 aaPredicted RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 PRCCQ92733 491 aaPredicted RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 PGM2Q96G03 612 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 CFAP36Q96G28 342 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 NAP1L3Q99457 506 aaPredicted RBP3.83□□□□□ -1.8
SMC4-208ENST00000467468 EPYCQ99645 322 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 C17orf62Q9BQA9 187 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 ZNF559Q9BR84 538 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 ACPTQ9BZG2 426 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 KRT23Q9C075 422 aa3.83□□□□□ -1.8
SMC4-208ENST00000467468 ZMYND12Q9H0C1 365 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms