RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 RHOCP08134 193 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 OR4D2P58180 307 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 DSTNP60981 165 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 TWF1Q12792 350 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 SLAMF1Q13291 335 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 RAPSNQ13702 412 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 SPESP1Q6UW49 350 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 PHYKPLQ8IUZ5 450 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 TCTE3Q8IZS6 198 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 STAG3L4Q8TBR4 150 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 ELMO1Q92556 727 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 FCGR1BQ92637 280 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 NCLNQ969V3 563 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 CEP19Q96LK0 163 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 TMEM74Q96NL1 305 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 ITGAMP11215 1152 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 CTPS1P17812 591 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 ITGB6P18564 788 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 TALDO1P37837 337 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 MLLT3P42568 568 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 CTSKP43235 329 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 SLC11A2P49281 568 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 HK3P52790 923 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 NFKB2Q00653 900 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 TNK1Q13470 666 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 AAK1Q2M2I8 961 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 TMCO2Q7Z6W1 182 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 CCDC190Q86UF4 302 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 GALNT11Q8NCW6 608 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 FLCNQ8NFG4 579 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 ST13P5Q8NFI4 369 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 SDHCQ99643 169 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 MAGEH1Q9H213 219 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 SLC52A3Q9NQ40 469 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 LEF1Q9UJU2 399 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 STOML2Q9UJZ1 356 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 RNF6Q9Y252 685 aa17.54■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF840PA6NDX5 716 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 FTH1P02794 183 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 LBPP18428 481 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 GNPDA1P46926 289 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 CD83Q01151 205 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 EMX2Q04743 252 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 ZNF177Q13360 481 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 ATXN7L2Q5T6C5 722 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 LETMD1Q6P1Q0 360 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 EID3Q8N140 333 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 KIAA1191Q96A73 305 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 TFB2MQ9H5Q4 396 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 TMPRSS11EQ9UL52 423 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 USP22Q9UPT9 525 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 C2orf81A6NN90 581 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 K7ERQ8 282 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 EEDO75530 441 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 SCO1O75880 301 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 STC2O76061 302 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 CYP2A6P11509 494 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 TIE1P35590 1138 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 PPP3CCP48454 512 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 SUOXP51687 545 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 CCL23P55773 120 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 PLIN5Q00G26 463 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 SEMG2Q02383 582 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 SNTA1Q13424 505 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 EFR3AQ14156 821 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 KANK2Q63ZY3 851 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 SYVN1Q86TM6 617 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 HS3ST5Q8IZT8 346 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 GLB1L3Q8NCI6 653 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 OR52B6Q8NGF0 335 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 OR5K1Q8NHB7 308 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 UQCC2Q9BRT2 126 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 NIPAL2Q9H841 368 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 CFL2Q9Y281 166 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 FCF1Q9Y324 198 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 PCDHB14Q9Y5E9 798 aa17.53■□□□□ 0.4
SNAPC3-205ENST00000467062 C5orf42Q9H799 3197 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 ANKRD66B4E2M5 251 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 KDELR3O43731 214 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 KERAO60938 352 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 FAM20BO75063 409 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 LCKP06239 509 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 ALPIP09923 528 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 SELPP16109 830 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 GKP32189 559 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 SOX6P35712 828 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 CDH4P55283 916 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 LCP2Q13094 533 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 RBBP7Q16576 425 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 ARMCX4Q5H9R4 360 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 CTSL3PQ5NE16 218 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 LHX8Q68G74 356 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 CDYL2Q8N8U2 506 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 RAET1EQ8TD07 263 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 IPCEF1Q8WWN9 437 aaPredicted RBP17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 PDLIM5Q96HC4 596 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 SLC30A2Q9BRI3 323 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 TM6SF2Q9BZW4 377 aa17.52■□□□□ 0.4
SNAPC3-205ENST00000467062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms