RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 EPHA3P29320 983 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ATP4BP51164 291 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 KCNJ2P63252 427 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ELF3P78545 371 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-215ENST00000465457 BTKQ06187 659 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 LSM12Q3MHD2 195 aaKnown RBP13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ACSBG2Q5FVE4 666 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ZNF787Q6DD87 383 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 HID1Q8IV36 788 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 TEX9Q8N6V9 391 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 DENND6BQ8NEG7 585 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 LKAAEAR1Q8TD35 194 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 CXorf40AQ8TE69 158 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 AGAP11Q8TF27 550 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ASZ1Q8WWH4 475 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 NUS1Q96E22 293 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 PDXPQ96GD0 296 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ZNF514Q96K75 400 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-215ENST00000465457 OR52B2Q96RD2 323 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 TBC1D10AQ9BXI6 508 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 ABCG8Q9H221 673 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 NDE1Q9NXR1 346 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 TUBD1Q9UJT1 453 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 IKZF3Q9UKT9 509 aa13.39□□□□□ -0.27
HDAC6-215ENST00000465457 STMND1H3BQB6 276 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 UBFD1O14562 309 aaKnown RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 NKX2-8O15522 239 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 MGRN1O60291 552 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 WFS1O76024 890 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 SIX3O95343 332 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 OTCP00480 354 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 ANXA5P08758 320 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 PRKAR1AP10644 381 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 UROSP10746 265 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 CYP2A7P20853 494 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 COL8A1P27658 744 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 CA5AP35218 305 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 CD97P48960 835 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 HNMTP50135 292 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 HK3P52790 923 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 AP1S2P56377 157 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 KLF10Q13118 480 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 PTK2BQ14289 1009 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 SQLEQ14534 574 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 IRF4Q15306 451 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 ATP1A1-AS1Q5TC04 95 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 NXNQ6DKJ4 435 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 GPRIN3Q6ZVF9 776 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 CHSY3Q70JA7 882 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 TREML1Q86YW5 311 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 KIF2BQ8N4N8 673 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 TP53I13Q8NBR0 393 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 SCAMP4Q969E2 229 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 MAGEB10Q96LZ2 347 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 CMKLR1Q99788 373 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 HGH1Q9BTY7 390 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 SHCBP1LQ9BZQ2 653 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 ZNF385DQ9H6B1 395 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 WDR55Q9H6Y2 383 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 CD84Q9UIB8 345 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 PTBP2Q9UKA9 531 aaKnown RBP13.38□□□□□ -0.27
HDAC6-215ENST00000465457 TMPRSS11EQ9UL52 423 aa13.38□□□□□ -0.27
HDAC6-215ENST00000465457 B2RBV5 119 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 E2F3O00716 465 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 MMP20O60882 483 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 SKAP2O75563 359 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-215ENST00000465457 KRT16P08779 473 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 HIST1H2AGP0C0S8 130 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-215ENST00000465457 HIST1H2ADP20671 130 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 CCR7P32248 378 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 PRLHRP49683 370 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 SH3BP2P78314 561 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 MXRA7P84157 204 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 PLOD1Q02809 727 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-215ENST00000465457 GTF2H3Q13889 308 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 NAA25Q14CX7 972 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 RBBP7Q16576 425 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 BCL7AQ4VC05 210 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 SYTL3Q4VX76 610 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 CYHR1Q6ZMK1 362 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 RNF165Q6ZSG1 346 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 RFLNAQ6ZTI6 216 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 PELI3Q8N2H9 469 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 GPR156Q8NFN8 814 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 TRPC4APQ8TEL6 797 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 TWIST2Q8WVJ9 160 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 HIST1H2AHQ96KK5 128 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 HIST1H2AJQ99878 128 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 EGFL8Q99944 293 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 H2AFJQ9BTM1 129 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 WRAP53Q9BUR4 548 aaKnown RBP13.37□□□□□ -0.27
HDAC6-215ENST00000465457 ZMYND15Q9H091 742 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 PARVBQ9HBI1 364 aa13.37□□□□□ -0.27
HDAC6-215ENST00000465457 KLC4Q9NSK0 619 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms