RNA–Protein interactions for RNA: ENST00000464702.6

PDPK1-208, Transcript of 3-phosphoinositide dependent protein kinase 1, human

TSL 2

Gene PDPK1, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPK1-208	ENST00000464702	CEP295NL	Q96MC4	621 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	GDAP1L1	Q96MZ0	367 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	ZNF396	Q96N95	335 aa	Predicted RBP	4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	NUDCD1	Q96RS6	583 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	INTS14	Q96SY0	518 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	PAFAH2	Q99487	392 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	MLPH	Q9BV36	600 aa	Predicted RBP	4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	C1QTNF1	Q9BXJ1	281 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	NYX	Q9GZU5	481 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	SOHLH2	Q9NX45	425 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	CYP39A1	Q9NYL5	469 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	COX16	Q9P0S2	106 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	EXO1	Q9UQ84	846 aa	Known RBP	4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	MAP3K4	Q9Y6R4	1608 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702		E9PCH4	1651 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	CD109	Q6YHK3	1445 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	POGZ	Q7Z3K3	1410 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	PRAG1	Q86YV5	1406 aa		4.38	□□□□□ -1.71
PDPK1-208	ENST00000464702	MLH3	Q9UHC1	1453 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	EFCAB6	Q5THR3	1501 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	LMTK2	Q8IWU2	1503 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	TAF1	P21675	1872 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	KPNA7	A9QM74	516 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	PRAMEF12	O95522	483 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	DIRAS3	O95661	229 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	PTBP3	O95758	552 aa	Known RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	SP1	P08047	785 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	TRIM21	P19474	475 aa	Known RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	NR2F2	P24468	414 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	HRH2	P25021	359 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	MT3	P25713	68 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	ETV1	P50549	477 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	CAPZA1	P52907	286 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	PNLIPRP2	P54317	469 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	PRKCE	Q02156	737 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	GABPB1	Q06547	395 aa	Predicted RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	IL11RA	Q14626	422 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	LETM2	Q2VYF4	491 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	PM20D1	Q6GTS8	502 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	MSANTD1	Q6ZTZ1	278 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	INTS8	Q75QN2	995 aa	Known RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	ERN2	Q76MJ5	926 aa	Known RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	ARMCX2	Q7L311	632 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	BANP	Q8N9N5	519 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	ATAD1	Q8NBU5	361 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	RBM15B	Q8NDT2	890 aa	Known RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	URGCP	Q8TCY9	931 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	GFI1	Q99684	422 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	MGME1	Q9BQP7	344 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	CCDC106	Q9BWC9	280 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	VCPKMT	Q9H867	229 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	TMOD2	Q9NZR1	351 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	DBNL	Q9UJU6	430 aa	Known RBP	4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	PLAGL1	Q9UM63	463 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	CCDC7	Q96M83	1385 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	KIDINS220	Q9ULH0	1771 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	A2M	P01023	1474 aa		4.37	□□□□□ -1.71
PDPK1-208	ENST00000464702	VWDE	Q8N2E2	1590 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PRR23A	A6NEV1	266 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	C5orf60	A6NFR6	353 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	LRRIQ4	A6NIV6	560 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	CTAGE5	O15320	804 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	SYNGR3	O43761	229 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	ZNF217	O75362	1048 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	WISP2	O76076	250 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	AKR7A3	O95154	331 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	LETM1	O95202	739 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PLG	P00747	810 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	FYN	P06241	537 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PDGFRA	P16234	1089 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	GM2A	P17900	193 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	ERCC2	P18074	760 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	NR1D1	P20393	614 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	CAST	P20810	708 aa	Known RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	AHR	P35869	848 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	TAGLN2	P37802	199 aa	Known RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	HOXA1	P49639	335 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	LINC01547	P58512	204 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PRKCZ	Q05513	592 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	TEF	Q10587	303 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	KCNC3	Q14003	757 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	RPS6KA1	Q15418	735 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	CCDC57	Q2TAC2	916 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	TWISTNB	Q3B726	338 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	GFI1B	Q5VTD9	330 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	SPATA19	Q7Z5L4	167 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	TLK2	Q86UE8	772 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	GBGT1	Q8N5D6	347 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	GCSAM	Q8N6F7	178 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PI4KAP1	Q8N8J0	262 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PPP4R1	Q8TF05	950 aa		4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	SPACA9	Q96E40	222 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	LINC00615	Q96LM1	132 aa	Predicted RBP	4.36	□□□□□ -1.71
PDPK1-208	ENST00000464702	PUS3	Q9BZE2	481 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms