RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TSFMP43897 325 aaKnown RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ZNF41P51814 821 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 CSNK2BP67870 215 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 RASGEF1BQ0VAM2 473 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 CAMK2DQ13557 499 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ZNF273Q14593 569 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 OPCMLQ14982 345 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 EXT1Q16394 746 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 C6orf136Q5SQH8 315 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 IL27RAQ6UWB1 636 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 FCRLAQ7L513 359 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ADCK2Q7Z695 626 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 LRRTM1Q86UE6 522 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 MYPOPQ86VE0 399 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 OR5T2Q8NGG2 359 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 METTL21AQ8WXB1 218 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 SEPT1Q8WYJ6 367 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 PIK3R3Q92569 461 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 TSACCQ96A04 125 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 SPATA33Q96N06 139 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 NECTIN4Q96NY8 510 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 CDCA3Q99618 268 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 TDRD1Q9BXT4 1180 aaKnown RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 DGCR6LQ9BY27 220 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 NYXQ9GZU5 481 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 MED20Q9H944 212 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 PFDN4Q9NQP4 134 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 PRDM4Q9UKN5 801 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ELF5Q9UKW6 265 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ANGPTL3Q9Y5C1 460 aa5.07□□□□□ -1.6
PTCD3-205ENST00000464541 ANTXRLA6NF34 631 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 KRTAP16-1A8MUX0 517 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 MAGEC1O60732 1142 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 DIAPH2O60879 1101 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 RPL35AP18077 110 aaKnown RBP5.06□□□□□ -1.6
PTCD3-205ENST00000464541 PTAFRP25105 342 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 AZGP1P25311 298 aaKnown RBP5.06□□□□□ -1.6
PTCD3-205ENST00000464541 OPRL1P41146 370 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 CETN2P41208 172 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 CACNG1Q06432 222 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 TAB1Q15750 504 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 FASTKD1Q53R41 847 aaKnown RBP5.06□□□□□ -1.6
PTCD3-205ENST00000464541 NOTUMQ6P988 496 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 CTR9Q6PD62 1173 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 Q6ZRP5 223 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 C11orf57Q6ZUT1 292 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-205ENST00000464541 RCOR2Q8IZ40 523 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 NME8Q8N427 588 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 IQUBQ8NA54 791 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 KIF18AQ8NI77 898 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 TAF15Q92804 592 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTCD3-205ENST00000464541 PGM2Q96G03 612 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 RAB3IPQ96QF0 476 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-205ENST00000464541 ST6GALNAC4Q9H4F1 302 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 SELENOKQ9Y6D0 94 aa5.06□□□□□ -1.6
PTCD3-205ENST00000464541 A0A087WV48 116 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 A0A0U1RQG5 324 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 A0A1W2PR80 420 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 ANXA2P2A6NMY6 339 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 SNURFLB1AK76 121 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 FPGTO14772 594 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 CEACAM4O75871 244 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 EPORP19235 508 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 UGT1A4P22310 534 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 MZT1Q08AG7 82 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 SRSF9Q13242 221 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 NONOQ15233 471 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 PTPN14Q15678 1187 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 RBBP7Q16576 425 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 UGCGQ16739 394 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 MTHFSDQ2M296 383 aaKnown RBP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 LACTB2Q53H82 288 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 PPP1R21Q6ZMI0 780 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 ABI3BPQ7Z7G0 1075 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 AMIGO1Q86WK6 493 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 CCDC60Q8IWA6 550 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 KLHDC1Q8N7A1 406 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 C9orf43Q8TAL5 461 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 ZNF519Q8TB69 540 aa5.05□□□□□ -1.6
PTCD3-205ENST00000464541 ZNF300Q96RE9 604 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-205ENST00000464541 TSPY2A6NKD2 308 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 MPTX1A8MV57 137 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-205ENST00000464541 H7C0S8 307 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 MOCS3O95396 460 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 QDPRP09417 244 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 FDPSP14324 419 aaKnown RBP5.04□□□□□ -1.6
PTCD3-205ENST00000464541 ELAVL4P26378 380 aaKnown RBP5.04□□□□□ -1.6
PTCD3-205ENST00000464541 LBX1P52954 281 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 MTCP1P56278 107 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 E2F5Q15329 346 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 SLFN11Q7Z7L1 901 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 GPC2Q8N158 579 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 GPATCH11Q8N954 259 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 ZNF486Q96H40 463 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-205ENST00000464541 FER1L6-AS2Q96M78 137 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 BTBD9Q96Q07 612 aa5.04□□□□□ -1.6
PTCD3-205ENST00000464541 GTPBP2Q9BX10 602 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms