RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 P2RX5Q93086 422 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 WBP2Q969T9 261 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 MAP3K3Q99759 626 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 PITPNM3Q9BZ71 974 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 DNAI2Q9GZS0 605 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 SIX2Q9NPC8 291 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 INTS9Q9NV88 658 aaKnown RBP3.7□□□□□ -1.82
CLK1-208ENST00000464454 GRID1Q9ULK0 1009 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 KCNJ14Q9UNX9 436 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 TNNQ9UQP3 1299 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 LIPT1Q9Y234 373 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 HEG1Q9ULI3 1381 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 A4D1N5 150 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 TMEM150CB9EJG8 249 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 KLF11O14901 512 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 GLRA3O75311 464 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 DDHD2O94830 711 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 NGFP01138 241 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SERPING1P05155 500 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 LBPP18428 481 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 ALDH4A1P30038 563 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 NKX2-1P43699 371 aaPredicted RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 GCNT1Q02742 428 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SLMAPQ14BN4 828 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 LCN1P1Q5VSP4 162 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SUSD4Q5VX71 490 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 CTR9Q6PD62 1173 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 IYDQ6PHW0 289 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 GBP6Q6ZN66 633 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 IL17RELQ6ZVW7 336 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 G2E3Q7L622 706 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SLC16A9Q7RTY1 509 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 CCDC91Q7Z6B0 441 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 TUSC5Q8IXB3 177 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 MARVELD2Q8N4S9 558 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 UXS1Q8NBZ7 420 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 KBTBD8Q8NFY9 601 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 CTCFLQ8NI51 663 aaPredicted RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 FIBINQ8TAL6 211 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 HPSE2Q8WWQ2 592 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 TSACCQ96A04 125 aaPredicted RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 PYCR2Q96C36 320 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 GIMAP5Q96F15 307 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SENP5Q96HI0 755 aaPredicted RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 LRR1Q96L50 414 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 GDAP1L1Q96MZ0 367 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 CCDC3Q9BQI4 270 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 UTP14AQ9BVJ6 771 aaKnown RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 FUT8Q9BYC5 575 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SDCBP2Q9H190 292 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 TMEM206Q9H813 350 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 SCRT2Q9NQ03 307 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 PPANQ9NQ55 473 aaKnown RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 INTS10Q9NVR2 710 aaKnown RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 SEPT10Q9P0V9 454 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 C19orf25Q9UFG5 118 aaPredicted RBP3.69□□□□□ -1.82
CLK1-208ENST00000464454 MAN1B1Q9UKM7 699 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 IL16Q14005 1332 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 IGSF1Q8N6C5 1336 aa3.69□□□□□ -1.82
CLK1-208ENST00000464454 HHLA1C9JL84 531 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 SLCO1B7G3V0H7 640 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 ZNF197O14709 1029 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 EPHB6O15197 1021 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 ZG16O60844 167 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 CDK2AP2O75956 126 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 EML2O95834 649 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 MOCS2O96007 188 aaPredicted RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD34CP0C6C1 535 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 DARSP14868 501 aaKnown RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 LHCGRP22888 699 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 KCNJ1P48048 391 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 SQLEQ14534 574 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 OPCMLQ14982 345 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 P2RY6Q15077 328 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 ODF2Q5BJF6 829 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 XKR6Q5GH73 641 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 FAM166AQ6J272 317 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 UGT3A1Q6NUS8 523 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD33Q7Z3H0 272 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 KIRREL3Q8IZU9 778 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 APCDD1Q8J025 514 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 NUP93Q8N1F7 819 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 CCDC63Q8NA47 563 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 ZNF248Q8NDW4 579 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 OR7G3Q8NG95 312 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 NCOA7Q8NI08 942 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 GRK7Q8WTQ7 553 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 SGF29Q96ES7 293 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 LITAFQ99732 161 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 ASCL2Q99929 193 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 CDK19Q9BWU1 502 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 LSG1Q9H089 658 aaKnown RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 SHARPINQ9H0F6 387 aa3.68□□□□□ -1.82
CLK1-208ENST00000464454 RSPH9Q9H1X1 276 aaPredicted RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 MMADHCQ9H3L0 296 aaPredicted RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 RIMS4Q9H426 269 aaPredicted RBP3.68□□□□□ -1.82
CLK1-208ENST00000464454 TUFT1Q9NNX1 390 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms