RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 H2AFJQ9BTM1 129 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 RMI1Q9H9A7 625 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 LRTM1Q9HBL6 345 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 FGF22Q9HCT0 170 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 SUFUQ9UMX1 484 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 EIF3LQ9Y262 564 aaKnown RBP14.05□□□□□ -0.16
COL5A1-205ENST00000464187 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.05□□□□□ -0.16
COL5A1-205ENST00000464187 A0A0C4DFX4 3053 aa14.05□□□□□ -0.16
COL5A1-205ENST00000464187 KCNE1BA0A087WTH5 132 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PRAMEF26H0Y7S4 382 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 HNRNPRO43390 633 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PSIP1O75475 530 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PDGFBP01127 241 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 GPIP06744 558 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 ACP5P13686 325 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 HRH2P25021 359 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 HTR1EP28566 365 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 GNPDA1P46926 289 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 MYBPC1Q00872 1141 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PWP1Q13610 501 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 NFATC4Q14934 902 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SUSD1Q6UWL2 747 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 ENPP7Q6UWV6 458 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PRR23BQ6ZRT6 265 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 GALNT13Q8IUC8 556 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 CHERPQ8IWX8 916 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 LIX1Q8N485 282 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 MCOLN3Q8TDD5 553 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PPM1MQ96MI6 270 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 FOPNLQ96NB1 174 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 CGREF1Q99674 301 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 FAM192AQ9GZU8 254 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 ACTR8Q9H981 624 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 AGPAT4Q9NRZ5 378 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 DMTF1Q9Y222 760 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 HS3ST3A1Q9Y663 406 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 KLHL33A6NCF5 533 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 KRT87PA6NCN2 255 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PABPN1LA6NDY0 278 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SOCS2O14508 198 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PDYNP01213 254 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 CKMT2P17540 419 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 IL10P22301 178 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 MAP4P27816 1152 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 HTR1BP28222 390 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SOX11P35716 441 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 MAPK9P45984 424 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 OR4D2P58180 307 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SIGLEC14Q08ET2 396 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 RPA4Q13156 261 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 GGTA1PQ4G0N0 100 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PYCR3Q53H96 274 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 TPRG1LQ5T0D9 272 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 ISLR2Q6UXK2 745 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 EPHX4Q8IUS5 362 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SLC13A3Q8WWT9 602 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SNX19Q92543 992 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 MTFMTQ96DP5 389 aaKnown RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 SCARF2Q96GP6 870 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-205ENST00000464187 ZBTB18Q99592 522 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 ACPTQ9BZG2 426 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 OR52A5Q9H2C5 316 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 PIF1Q9H611 641 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 INVSQ9Y283 1065 aa14.04□□□□□ -0.16
COL5A1-205ENST00000464187 A0A1W2PPC4 97 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 PRSS38A1L453 326 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 SAC3D1A6NKF1 404 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 ARHGEF33A8MVX0 844 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 K7ESF4 209 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 PI15O43692 258 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 NDUFS2O75306 463 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 SEC22BO75396 215 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 KRT6AP02538 564 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CATP04040 527 aaKnown RBP14.03□□□□□ -0.16
COL5A1-205ENST00000464187 KRT6BP04259 564 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 KELP23276 732 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 KRT6CP48668 564 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 HNMTP50135 292 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CCR3P51677 355 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 AP1S2P56377 157 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 MTPNP58546 118 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CPSF6Q16630 551 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CYP51A1Q16850 503 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 PTCHD3Q3KNS1 767 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CACHD1Q5VU97 1274 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 METRNLQ641Q3 311 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CWF19L1Q69YN2 538 aaKnown RBP14.03□□□□□ -0.16
COL5A1-205ENST00000464187 PPP4R4Q6NUP7 873 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 PDXPQ96GD0 296 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 TIMM29Q9BSF4 260 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 IER2Q9BTL4 223 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 OSBPL11Q9BXB4 747 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 DPY30Q9C005 99 aa14.03□□□□□ -0.16
COL5A1-205ENST00000464187 RPF2Q9H7B2 306 aaKnown RBP14.03□□□□□ -0.16
COL5A1-205ENST00000464187 CARS2Q9HA77 564 aaKnown RBP14.03□□□□□ -0.16
COL5A1-205ENST00000464187 C1orf109Q9NX04 203 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms