RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FCRLBQ6BAA4 426 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 CPEB2Q7Z5Q1 589 aaKnown RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 DOLPP1Q86YN1 238 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 KRT222Q8N1A0 295 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 MDS2Q8NDY4 140 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 OR13J1Q8NGT2 312 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 LKAAEAR1Q8TD35 194 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 CYTH2Q99418 400 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 TREX2Q9BQ50 279 aaPredicted RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 DRC3Q9H069 523 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 KCNK13Q9HB14 408 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 MRPS30Q9NP92 439 aaKnown RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 ANKRD10Q9NXR5 420 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 UTP6Q9NYH9 597 aaKnown RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 C19orf25Q9UFG5 118 aaPredicted RBP13.7□□□□□ -0.22
SMC1A-204ENST00000463684 PPT2Q9UMR5 302 aa13.7□□□□□ -0.22
SMC1A-204ENST00000463684 A0A0A6YYC8 382 aaPredicted RBP13.69□□□□□ -0.22
SMC1A-204ENST00000463684 A0A1W2PPV9 198 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 ASPDHA6ND91 283 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 I3L1I5 382 aaPredicted RBP13.69□□□□□ -0.22
SMC1A-204ENST00000463684 KPNA5O15131 536 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 SUN1O94901 812 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 PKMP14618 531 aaKnown RBP13.69□□□□□ -0.22
SMC1A-204ENST00000463684 MAGEA1P43355 309 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 BDKRB1P46663 353 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 AVPR1BP47901 424 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 PRAMEP78395 509 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 OC90Q02509 493 aaPredicted RBP13.69□□□□□ -0.22
SMC1A-204ENST00000463684 NDUFA9Q16795 377 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 CCSMST1Q4G0I0 132 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 AARS2Q5JTZ9 985 aaKnown RBP13.69□□□□□ -0.22
SMC1A-204ENST00000463684 MFSD4BQ5TF39 518 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 SPINK14Q6IE38 97 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 C11orf63Q6NUN7 778 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 C3P1Q6ZMU1 363 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 ZC3H7AQ8IWR0 971 aaKnown RBP13.69□□□□□ -0.22
SMC1A-204ENST00000463684 FAM71DQ8N9W8 422 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 SCMH1Q96GD3 660 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 FRMD6Q96NE9 622 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 PANX3Q96QZ0 392 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 DMRTA2Q96SC8 542 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 HES7Q9BYE0 225 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 SLC2A6Q9UGQ3 507 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 NFS1Q9Y697 457 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 MTORP42345 2549 aa13.69□□□□□ -0.22
SMC1A-204ENST00000463684 IGHV3-20A0A0C4DH32 117 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 FOXS1O43638 330 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 SNRNP200O75643 2136 aaKnown RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 SP1P08047 785 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 CYC1P08574 325 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 CTNNA1P35221 906 aaKnown RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 PTPN7P35236 360 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 RPA3P35244 121 aaPredicted RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 MAT1AQ00266 395 aaKnown RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 CDH17Q12864 832 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 FASTKQ14296 549 aaKnown RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 TSTD2Q5T7W7 516 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 OTOAQ7RTW8 1153 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 GALNTL5Q7Z4T8 443 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 TAB3Q8N5C8 712 aaPredicted RBP13.68□□□□□ -0.22
SMC1A-204ENST00000463684 OR52K1Q8NGK4 314 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 TRIM51Q9BSJ1 452 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 VN1R1Q9GZP7 353 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 RIMKLBQ9ULI2 386 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 PCDHA3Q9Y5H8 950 aa13.68□□□□□ -0.22
SMC1A-204ENST00000463684 NCOA6Q14686 2063 aaPredicted RBP13.67□□□□□ -0.22
SMC1A-204ENST00000463684 FAM221AA4D161 298 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 KRT87PA6NCN2 255 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SOWAHDA6NJG2 315 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ADAM10O14672 748 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ZNHIT1O43257 154 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 CBFA2T2O43439 604 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 MFAP3LO75121 409 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 HOXB4P17483 251 aaPredicted RBP13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ADRA1DP25100 572 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 TTPAP49638 278 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ST13P50502 369 aaKnown RBP13.67□□□□□ -0.22
SMC1A-204ENST00000463684 HSF1Q00613 529 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 TSTA3Q13630 321 aaPredicted RBP13.67□□□□□ -0.22
SMC1A-204ENST00000463684 FAM53BQ14153 422 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 EXT1Q16394 746 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 MAPKAPK3Q16644 382 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 SLC25A25Q6KCM7 469 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 LANCL3Q6ZV70 420 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 ZNF534Q76KX8 674 aa13.67□□□□□ -0.22
SMC1A-204ENST00000463684 TMEM200AQ86VY9 491 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms